Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2220 |
Symbol | rpsA |
ID | 6988336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2387396 |
End bp | 2389069 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643380503 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_002263586 |
Protein GI | 209695657 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000298041 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT CTTTTGCTCA ACTCTTTGAA GAGTTTTTAT CTGAAACTGA ATTCCAACAA GGCAGCATCG TTAAAGGTGT TGTTGTTGCT ATCGAGAACG GTTTCGTTCT TGTTGACGCA GGCCTTAAAT CTGAAGCAGC AATCCCAGCT GAACAATTCA AGAACGCTGC TGGCGAACTT GAAGTTGAAG TTGGTTCTGA AGTAGACGTT GCTCTTGACG CTGTTGAAGA TGGTTTCGGT GAAACTCAAC TTTCTCGTGA GAAAGCGAAG CGTCACGAAG CTTGGATTCA ACTTGAAAAA GCATATGAAG ATGCTGAAAC AGTTATGGGT GTTATTAACG GTAAAGTTAA AGGCGGCTTC ACAGTTGAAC TTAACGGTAT CCGTGCATTC CTACCTGGTT CTCTTGTTGA TGTACGTCCA GTACGTGACA CTCTGCACCT TGAAGGCAAA GAGCTAGAGT TCAAAGTAAT CAAACTTGAC CAAAAGCGTA ACAACGTTGT TGTTTCACGT CGTGCTGTTA TCGAATCTGA AAACAGTGTT GAACGTGACG AGTTACTTGC TTCTCTACAA GAAGGCATGG AAGTTAAAGG TATCGTTAAG AACCTTACTG ACTACGGTGC ATTCGTTGAT CTAGGTGGCG TTGACGGTCT ACTACACATC ACAGATATGG CTTGGAAGCG TGTTAAGCAC CCATCTGAGA TCGTAAATGT TGGTGACGAG ATCAATGTTA AAGTTCTTAA GTTCGATCGT GAGCGCACTC GTGTTTCTCT AGGTCTTAAG CAACTTGGCG AAGATCCATG GGTAGCTATC GCTAAGCGTT ACCCAGAAGG TCACAAACTT TCTGGTCGTG TTACTAACCT AACTGATTAC GGCTGCTTCG TTGAAATCGA AGAAGGCGTT GAAGGTCTAG TACACGTTTC TGAAATGGAT TGGACTAACA AGAACATCCA CCCTTCTAAA GTTGTCAATG TAGGCGACGA AGTTGAGGTT ATGGTTCTTG AGATTGACGA AGAACGTCGT CGTATCTCTC TAGGTCTGAA ACAATGTAAA GCTAACCCTT GGCAGACATT CGCTGAAGCG CAAGCTAAAG GCGACCATGT TAGTGGTAAG ATTAAATCTA TCACTGATTT CGGTATCTTC ATCGGTCTTG ACGGCGGCAT CGACGGTCTA GTTCACCTTT CTGACATTTC TTGGAATGCT ACAGGTGAAG ACGCGGTACG TGAGTACAAG AAAGGCGACG AAATCTCTGC TGTTGTTCTA GCTGTTGATG CTGAGCGTGA GCGTATTTCT CTAGGTGTTA AACAAATGGA AGAAGACCCA TTTAACAACT ACCTAGCAGA CAACAAGAAA GGTACTCTAG TAAACGGTAC TGTTTCAGCT GTTGACGCTA AAGGCGCTAC AATTACTCTT GCAGATAGCG TAGAAGGTTA CATCCGTACT TCTGAGCTTT CTCGTGACCG TATTGAAGAT GCATCTCTAA TCCTAAGCGT TGGCGATAGC GTTGAAGCGA AGTTCACTGG TGTAGACCGT AAGAACCGCG TAGTTAACCT ATCTATCAAA GCTAAAGATG AAGCTGATGA GCAAGAAGCA ATGGCGACAC TGAATACTAA ACCAGAAGAT GGTGGTTTCG GTAGCGCAAT GGCTGACGCT TTCAAAGCAG CTAAAGGCGA ATAA
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Protein sequence | MTESFAQLFE EFLSETEFQQ GSIVKGVVVA IENGFVLVDA GLKSEAAIPA EQFKNAAGEL EVEVGSEVDV ALDAVEDGFG ETQLSREKAK RHEAWIQLEK AYEDAETVMG VINGKVKGGF TVELNGIRAF LPGSLVDVRP VRDTLHLEGK ELEFKVIKLD QKRNNVVVSR RAVIESENSV ERDELLASLQ EGMEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE INVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPEGHKL SGRVTNLTDY GCFVEIEEGV EGLVHVSEMD WTNKNIHPSK VVNVGDEVEV MVLEIDEERR RISLGLKQCK ANPWQTFAEA QAKGDHVSGK IKSITDFGIF IGLDGGIDGL VHLSDISWNA TGEDAVREYK KGDEISAVVL AVDAERERIS LGVKQMEEDP FNNYLADNKK GTLVNGTVSA VDAKGATITL ADSVEGYIRT SELSRDRIED ASLILSVGDS VEAKFTGVDR KNRVVNLSIK AKDEADEQEA MATLNTKPED GGFGSAMADA FKAAKGE
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