Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0841 |
Symbol | gltA |
ID | 6986685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 935590 |
End bp | 936879 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643379245 |
Product | type II citrate synthase |
Protein accession | YP_002262348 |
Protein GI | 209694420 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGATA AGAAAGCAAC TCTTCACATT GAAGGTCAAG CACCAATAGA CATGCCAGTA ATGGAAGGCA CTATCGGACC TGAAGTGATT GATGTACGCA AATTAGGCGC TAATGGTTAC TTCACTTTTG ACCCTGGTTT TCTTGCCACT GCATCTTGTG AATCTCAAAT TACCTACATT GATGGTGACA AAGGTGTATT ACTACACCGT GGCTTCCCAA TCGATCAGTT AGCAAATAAT GCTGATTACT TAGAAGTATG TTACATACTA CTGAATGGCC AAGCACCAAG CCGTGAAGAA TACGAAACGT TCAAAGATAT TGTTACCCGT CATACGATGG TTCACGAACA AATTTCAAGC TTCTTCCATG GGTTCCGTCG TGATGCTCAC CCAATGGCTG TAATGTGTGG TGTAGTTGGT GCATTAGCGG CCTTCTACCA TGATTCACTA GATATTAATA ATGATGAACA TCGTGAAATT GCGGCATTTA GACTTCTATC TAAAATGCCA ACACTTTCAG CGATGTGCTA CAAATATTCG ATTGGTCAAC CGTTTATCTA TCCACGTAAC GACTTAACGT ATGCTGAAAA CTTCTTGCAC ATGATGTTCG CAAACCCATG TGAAGAATAT GAAGTAAATC CTGTTGTTGC TCGTGCTATG GATAAAATAT TTACTCTGCA TGCTGATCAT GAACAAAATG CGTCAACATC AACAGTTCGT TTAGCGGGCT CTTCAGGTGC AAACCCATTT GCATGTATCG CCGCAGGTAT TGCTTCTCTT TGGGGACCAG CACATGGTGG TGCAAATGAA GCTTGTTTGC GTATGCTTGA AGAAATTGGC TCTCTTGATA ATATTGATGA GTACGTTGCA AAAGCAAAAG ATAAGGAAGA CCCTTTCCGA TTAATGGGCT TTGGACACCG TGTTTATAAA AACTACGATC CACGAGCAAC AGTAATGCGT GAAGCGTGTC ATGAAGTATT GAAAGAGCTA AACATTAAAG ATCCACTGTT AGATGTAGCA ATGGAACTTG AACGAATTGC GCTATCTGAT GAATACTTTG TATCTAAAAA ACTGTATCCA AACGTAGATT TCTACTCAGG TATTATTCTA AAAGCGATTG GGATCCCTGC ATCAATGTTT ACTGTTATTT TTGCACTGTC TCGTACTGTT GGTTGGATCG CACACTGGAG CGAAATGCAC AGTGATCCAG ATAACCGTAT TGGTCGTCCT CGCCAACTTT ATACAGGTGA AGAGTTACGC GAATTTAAAC CACTTCACGA ACGTGAATAA
|
Protein sequence | MADKKATLHI EGQAPIDMPV MEGTIGPEVI DVRKLGANGY FTFDPGFLAT ASCESQITYI DGDKGVLLHR GFPIDQLANN ADYLEVCYIL LNGQAPSREE YETFKDIVTR HTMVHEQISS FFHGFRRDAH PMAVMCGVVG ALAAFYHDSL DINNDEHREI AAFRLLSKMP TLSAMCYKYS IGQPFIYPRN DLTYAENFLH MMFANPCEEY EVNPVVARAM DKIFTLHADH EQNASTSTVR LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLRMLEEIG SLDNIDEYVA KAKDKEDPFR LMGFGHRVYK NYDPRATVMR EACHEVLKEL NIKDPLLDVA MELERIALSD EYFVSKKLYP NVDFYSGIIL KAIGIPASMF TVIFALSRTV GWIAHWSEMH SDPDNRIGRP RQLYTGEELR EFKPLHERE
|
| |