Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06284 |
Symbol | |
ID | 5558715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1462468 |
End bp | 1463526 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640910758 |
Product | hypothetical protein |
Protein accession | YP_001448403 |
Protein GI | 156977497 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT ACATGGATTT TATAATGAAC AAAAAATTCC TAGCAGCAGC GATCGCAGCA GCAACATTCG GTACACAAGC AGTAGAGCTT TACAACAACG ACGGCACTAC TTTCTCTATC GGTGGTCACG TTTCAGTTAA CCTAAACGGT TCTGAGCAAG GTGATACAGA TGTTGGCACT AATTCTCCAC GTATCAACTT CACAGCAACT CAAGATCTAG GCAACGGCTT CACAGCTGAC GCTCGTGGTG AGTGGGCTCT AAACTACCTA GACGGCGGTG AAGAAACATT CACTACTCGT CTTGGCTACC TAGGCCTAAC TCACGACGTA TACGGCCGTG CAGTTGGTGG TACTCAATGG GCACCTTACT ACGATGTAGC TGGTGTTGCT GATATGCCAA TCGCGTTTGC GAACGACTTT ATCTACGATG ACCACGGTAA CCTAGGTACT GGTCGTGCAG ATAAGATGCT TTCTTACCGC AACGCAATCG AGCTAGGTGA AGCTGGTGCA ATCAACTTCG GTCTAGGTTG GCAAGGTGCT AAAGGTGACG AGTCTAAAGC AGATCGTTAC GATGACCGTG CTCAGCTAGC ATTGTCTTAC TCAGTACTAG GCGCGAAAGT TGGTTACACA TACAACACTG GTGATTTCAA AGAGTTTGGC TCTAAGAATG AAACCGCTGA ATCTCACCTA GTTTCTGCTT CTTACGGTTC TTACGGGCAA GGCCTATACA TCGCTGCAGT GTACGGTTCG AATGAATACA TGAACTTCGA TGGTCTAAAA CCAACGTCGT CACGTCTTGC AGAAAGTGAT GCGTACGAAG CGCTACTAGC ATACGCGCTA CCAAGCAGCC TAAACCTAAG CATCAACTAC GAAATGGTTG AAGGCAAGGT AAACTCTGGC GATAAGACTA AAACTGCCCG TGAAGAGATG GCTGTTCAAG CTGAATACAA CTTCACTTCT AAATTTGTTG GTTACGCTGG TTACCAGTTC GACCTAAACA ACGAAGAAGG CCACACTCAA GACGACAAAT GGGCACTTGG TGCTCGTTAC TACCTATAA
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Protein sequence | MNKYMDFIMN KKFLAAAIAA ATFGTQAVEL YNNDGTTFSI GGHVSVNLNG SEQGDTDVGT NSPRINFTAT QDLGNGFTAD ARGEWALNYL DGGEETFTTR LGYLGLTHDV YGRAVGGTQW APYYDVAGVA DMPIAFANDF IYDDHGNLGT GRADKMLSYR NAIELGEAGA INFGLGWQGA KGDESKADRY DDRAQLALSY SVLGAKVGYT YNTGDFKEFG SKNETAESHL VSASYGSYGQ GLYIAAVYGS NEYMNFDGLK PTSSRLAESD AYEALLAYAL PSSLNLSINY EMVEGKVNSG DKTKTAREEM AVQAEYNFTS KFVGYAGYQF DLNNEEGHTQ DDKWALGARY YL
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