Gene VIBHAR_02906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02906 
Symbol 
ID5555772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2926455 
End bp2927672 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content49% 
IMG OID640908388 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_001446086 
Protein GI156975179 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTATGT TGTCACCGGT AGGCAACACA GTAGAATCAT CTTGGAAAGC CCTGCTAGCA 
GGTCAAAGCG GTATCGTGAA CATCGAACAC TTCGATGCAA CGAACTTCTC GACTCGTTTT
GCTGGTCTTG TGAAAGATTT TGATTGCACA GAGTACATGT CTAAGAAAGA TGCTCGTAAG
ATGGATTTAT TCATCCAGTA CGGCATTGCA GCGGGTATCC AAGCACTGGA TGACTCTGGC
TTAGAAATTA CCGAAGAAAA CGCAGCTCGA GTTGGTGTAG CAATCGGCTC AGGCATCGGC
GGTCTAGACC TAATCGAAAC AGGCCATACA GCGCTTGTTG AAAAAGGTCC TCGCAAAGTT
AGCCCATTTT TTGTTCCTTC GACCATCGTA AACATGGTTG CAGGTAACCT ATCTATCATG
CGTGGTCTTC GTGGTCCAAA CATCGCGATC TCTACGGCAT GTACTACAGG TCTACACAAC
ATCGGCCACG CAGCGCGTAT GATTGCATAC GGTGATGCTG AGGCGATGGT TGCTGGTGGT
TCAGAGAAAG CATCTACACC ACTAGGTATG GCTGGTTTCG GTGCAGCGAA AGCACTTTCA
ACTCGTAACG ATGAGCCTCA GAAAGCGTCT CGTCCATGGG ATAAGGGCCG TGATGGCTTT
GTTCTTGGTG ACGGTGCGGG CATGATGGTT CTTGAAGAGT ACGAGCACGC AAAAGCACGT
GGCGCTAAGA TCTACGCAGA GCTAGTTGGC TTTGGTATGT CTGGTGACGC TTACCACATG
ACTTCTCCAA GTGAAGACGG TTCAGGTGGC GCTCTAGCAA TGGAAGCGGC GATGCGTGAT
GCAGACATCA CAGGCACTCA AGTTGGTTAC GTGAACGCTC ACGGTACATC GACGCCTGCT
GGTGACGTTG CTGAGATCAA GGGCGTGAAA CGTGCTCTTG GTGAAGAAGG CTCTAAACAA
GTATTAGTAT CTTCAACTAA ATCTATGACT GGTCACCTTC TAGGTGCTGC AGGTTCTGTT
GAAGCTATCA TTACAGTGAT GTCTCTAGTT GACCAAATCG TTCCACCAAC GATTAACCTA
GATGATCCTG AAGAAGGCCT AGATATCGAT CTTGTTCCGC ATACTGCGCG CGAAGTTGAT
ATGGAATACG CAATCTGTAA CTCGTTTGGC TTCGGCGGTA CGAACGGTTC GCTAGTATTC
AAAAAATTCG CTGAGTAA
 
Protein sequence
MGMLSPVGNT VESSWKALLA GQSGIVNIEH FDATNFSTRF AGLVKDFDCT EYMSKKDARK 
MDLFIQYGIA AGIQALDDSG LEITEENAAR VGVAIGSGIG GLDLIETGHT ALVEKGPRKV
SPFFVPSTIV NMVAGNLSIM RGLRGPNIAI STACTTGLHN IGHAARMIAY GDAEAMVAGG
SEKASTPLGM AGFGAAKALS TRNDEPQKAS RPWDKGRDGF VLGDGAGMMV LEEYEHAKAR
GAKIYAELVG FGMSGDAYHM TSPSEDGSGG ALAMEAAMRD ADITGTQVGY VNAHGTSTPA
GDVAEIKGVK RALGEEGSKQ VLVSSTKSMT GHLLGAAGSV EAIITVMSLV DQIVPPTINL
DDPEEGLDID LVPHTAREVD MEYAICNSFG FGGTNGSLVF KKFAE