Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02863 |
Symbol | |
ID | 5554317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 2882277 |
End bp | 2883338 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640908345 |
Product | putative periplasmic protease |
Protein accession | YP_001446043 |
Protein GI | 156975136 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAATTTT TATTAGATTA CGGTCTGTTT TTAGCCAAGA TTGTCACCGT TGTAGCGGCA GTCGTTGTGC TGCTGATTAT TGCAAAATCA GCGGGTGGTA AGTCGGGTGC GGCAAAAGGT GAATTAGAAG TCACGAATCT TTCTGAGCGC CATAAAGACG CGGTAGAGCA GCTAGAACAC CACTTACACG ATGACGCTTT CATCAAAGCG CGTGATAAAG CGGTTAAGAA AGAAGAAAAA GAAAAGAACA AATCTCGCGA GAAAGAAATC AAACAAGCGA GCAAAGAAGG TTCTCTCGAT AGCAAACGCG AACCACACCT GTTCGTTTTG GACTTTAACG GCAGTATCGA TGCTAAAGAA GTAGCATCAC TACGTGAAGA GGTGACAGCA GTATTAGCCG TTGCTCGCGA AGGCGATGAA GTTCTGCTTC GCCTAGAGTC TGGTGGTGGC ATGGTTCATG GCTATGGCTT GGCATCTTCT CAACTTGATC GAATCAAAGC TGCGGGTCTG CCTCTGACGA TTTCTGTCGA CAAAGTTGCA GCAAGTGGCG GTTATATGAT GGCGTGTGTG GCAGACAAGA TTGTGTCTGC GCCGTTTGCG ATTGTGGGTT CTATCGGCGT TATTGCACAG ATCCCTAACT TCAACAAACT GTTGAAAAAG CATGATATCG AATACGAGCA GTTAACGGCA GGTGAGTACA AACGCACACT GACCATGTTT GGTGAGAACA CCGACAAAGC GCGTGATAAA TTCAAGCAAG AGCTTGAAGA AACACACGTA CTGTTCAAAG ACTTCATCAG TGAACGTCGC CCAGCGCTAG AACTTGAAAA AGTCGCAACA GGTGAGCACT GGTTTGGTAC GCAAGCGAAA GAACTCGGAC TGGTAGATGA AATCAGCACT TCCGACGATC TAGTTGTTGC AGCATGCAAA GAGAAAACCG TACTAGCAGT GCATTACGTG CAAAAGAAAA AACTGGCAGA CAAGCTTGCC GGTGTTGCAA GTAAAGTGGC TGATAGCGTC GTACTTAAAC TTGCAGAACG TGGTCAAAAG CCAATTGTGT AA
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Protein sequence | MEFLLDYGLF LAKIVTVVAA VVVLLIIAKS AGGKSGAAKG ELEVTNLSER HKDAVEQLEH HLHDDAFIKA RDKAVKKEEK EKNKSREKEI KQASKEGSLD SKREPHLFVL DFNGSIDAKE VASLREEVTA VLAVAREGDE VLLRLESGGG MVHGYGLASS QLDRIKAAGL PLTISVDKVA ASGGYMMACV ADKIVSAPFA IVGSIGVIAQ IPNFNKLLKK HDIEYEQLTA GEYKRTLTMF GENTDKARDK FKQELEETHV LFKDFISERR PALELEKVAT GEHWFGTQAK ELGLVDEIST SDDLVVAACK EKTVLAVHYV QKKKLADKLA GVASKVADSV VLKLAERGQK PIV
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