Gene VIBHAR_02730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02730 
Symbol 
ID5555212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2749978 
End bp2752614 
Gene Length2637 bp 
Protein Length878 aa 
Translation table11 
GC content47% 
IMG OID640908212 
ProductDNA gyrase subunit A 
Protein accessionYP_001445915 
Protein GI156975008 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATT TAGCTAAAGA GATCACGCCC GTAAACATTG AAGATGAGCT TAGAGGTTCA 
TACCTAGACT ACGCGATGTC AGTAATCGTG GGTCGTGCTC TTCCAGATGT GCGTGATGGC
CTAAAACCAG TACACCGCCG CGTTTTATTC GCGATGAACG TACTAGGCAA CGATTGGAAC
AAACCATATA AAAAATCAGC CCGTGTTGTC GGCGACGTAA TCGGTAAATA TCACCCACAC
GGTGATAGTG CTGTGTACGA CACAATCGTA CGTATGGCTC AGCCGTTCTC ACTTCGTTAC
ATGCTGGTCG ATGGTCAAGG TAACTTTGGC TCGATCGATG GCGACTCTGC TGCGGCAATG
CGTTATACCG AAGTACGTAT GGCGAAAATT GCCCACGAAC TTCTGGCTGA CCTAGATAAA
GAAACCGTGG ACTACGTACC TAACTACGAT GGTACGGAGC AAATCCCAGC GGTTCTTCCA
ACTAAAATTC CTAACCTATT GGTAAACGGT GCTTCTGGTA TCGCGGTAGG TATGGCAACC
AACATCCCAC CGCACAACCT TGGCGAAGTG ATCGATGGCT GTCTTGCATT CATCAATAAT
GAAGAAATCA CGATTGATCA ACTAATGGAT TACATTCCTG GTCCTGATTT CCCAACGGCA
GCGCTAATCA GCGGTCGTAA AGGCATCGTA GACGCGTACA AAACTGGTCG CGGCAAGATC
TACATGCGTT CAAAAGCGGA AATCGAAGTG GAGAAGAATG GTAAAGAAAC CATCATCGTC
ACTGAAATCC CTTACCAGGT AAACAAAGCT CGCTTGATCG AAAAGATCGC TGAGCTAGTT
AAAGATAAGA AAGTAGAAGG CATCAGTGCG CTACGTGACG AGTCTGATAA AGACGGTATG
CGTATCGTAA TTGAATGTAA GCGCGACGCT GTGGGTGAAG TGGTTCTAAA CAACCTTTAC
GCACAAACTC AGCTTCAAAC GACTTTCGGT ATCAACATGG TTGCGCTAAA CAACGGCCAG
CCACAGTTAT TCAACCTAAA AGACATGTTG AAGTGCTTCG TTGACCACCG TCGTGAAGTT
GTCACTCGTC GTACTATCTT CGAACTACGC AAAGCGCGTG AACGTGCTCA TATCCTTGAA
GCACTTTCTC TTGCTCTTGC AAACATCGAT GAAGTTATTG AGCTAATCAA AAACGCACCA
ACACCAGCAG AAGCAAAAGT TGGCTTGGTA TCGCGTGGTT GGGATCTTGG TAACGTAGCA
TCAATGCTTG AGCGTGCTGG TACTGATGCA GCGCGTCCGG AATGGCTAGA AGATCAATAC
GGTATCCGTG ATGGTCTGTA CTACCTAACT GAGACTCAAG CGCAAGCTAT TCTAGAACTT
CGTCTACACC GTCTAACCGG TCTAGAGCAC GAGAAGATTC TTGATGAATA CAAAGCACTT
CTAGATGAAA TCGCAGAGCT AATGCACATC CTTGCAAGCA CTGAGCGTCT AATGGAAGTG
ATCCGCGAAG AGCTTGAAGC AGTTCGCGAT GGTTACGGCG ATGCTCGTCG TACCGAAATC
ACAGCAGCTA CCCATGACAT CGACATGGAA GAGCTGATTG CTCGTGAAGA CGTAGTAGTA
ACTCTGTCTC ACGAAGGTTA CGTTAAGTAC CAAATTCTAA GCGACTACGA AGCTCAGCGT
CGTGGTGGTA AAGGTAAGAG TGCAACGAAG ATGAAAGATG AAGACTTCAT CGAACGTCTA
CTTGTTGCAA ATACTCACGA TAACATTCTG TGTTTCTCTA CTCGTGGTAA GACTTACCGT
CTGAAAGTTT ACCAATTGCC TCATGCAACT CGTACTGCAC GTGGTAAGCC AATCGTAAAC
ATCCTTCCTC TAGAGGAAGG TGAGCGTATC ACTGCAATTC TTCCTGTTGA TGAGTTCTCA
CCAGAGAAAT TTATCTTCAT GGCGACAGGC GATGGTACGG TTAAGAAGAC CCCACTGAAC
CAGTTTGCAA ACGTACGTTC AAACGGCCTA ATCGCTGTGA ACCTACGTGA TGATGACTCA
CTAATTGGCG TTGATATCAC AAACGGCGAT AGCGACATCA TGCTGTTCTC TAAAGCAGGT
AAAGTGGTTC GCTTCAGCGA AGACAAAGTA CGTGCAATGG GTCGTACAGC GGCAGGTGTT
CGCGGTATGA AACTAGCAGA CGAAGACCAA GTTGTTTCTC TAATCGTTCC GTCTAACGAA
GGCGATATCC TAACGGTTAC ACAAAACGGC TACGGTAAGC GTACTGAACT AGCGGAATAC
CCAACGAAAG GTCGTGCAAC TCAGGGCGTT GTGTCTATCA AGGTTTCTGA GCGTAACGGT
CCAGTTGTTG GCGCGGTACA AGTAGAAGAA GGCGACGAGA TGATGATGAT CACCGACGCT
GGTACTTTAG TTCGTACACG TGTTGCGGAA GTTAGCCAAG TTGGTCGTAA CACCCAAGGT
GTGACACTTA TCCGTACAGC TGAAGACGAA TCAGTAGTTG GCCTACAACG CATCGACGAA
GTTGAAGAAG TTGAATTGCC AGAAGGCGAA GAAGCAGAAG CAACAGAGGC GAACGCAGAA
GGTCAAGCTC CTGAAGCGCC AGCAGACGAC GCAGCTGAAG GTTCAGAAGA AGAGTAA
 
Protein sequence
MSDLAKEITP VNIEDELRGS YLDYAMSVIV GRALPDVRDG LKPVHRRVLF AMNVLGNDWN 
KPYKKSARVV GDVIGKYHPH GDSAVYDTIV RMAQPFSLRY MLVDGQGNFG SIDGDSAAAM
RYTEVRMAKI AHELLADLDK ETVDYVPNYD GTEQIPAVLP TKIPNLLVNG ASGIAVGMAT
NIPPHNLGEV IDGCLAFINN EEITIDQLMD YIPGPDFPTA ALISGRKGIV DAYKTGRGKI
YMRSKAEIEV EKNGKETIIV TEIPYQVNKA RLIEKIAELV KDKKVEGISA LRDESDKDGM
RIVIECKRDA VGEVVLNNLY AQTQLQTTFG INMVALNNGQ PQLFNLKDML KCFVDHRREV
VTRRTIFELR KARERAHILE ALSLALANID EVIELIKNAP TPAEAKVGLV SRGWDLGNVA
SMLERAGTDA ARPEWLEDQY GIRDGLYYLT ETQAQAILEL RLHRLTGLEH EKILDEYKAL
LDEIAELMHI LASTERLMEV IREELEAVRD GYGDARRTEI TAATHDIDME ELIAREDVVV
TLSHEGYVKY QILSDYEAQR RGGKGKSATK MKDEDFIERL LVANTHDNIL CFSTRGKTYR
LKVYQLPHAT RTARGKPIVN ILPLEEGERI TAILPVDEFS PEKFIFMATG DGTVKKTPLN
QFANVRSNGL IAVNLRDDDS LIGVDITNGD SDIMLFSKAG KVVRFSEDKV RAMGRTAAGV
RGMKLADEDQ VVSLIVPSNE GDILTVTQNG YGKRTELAEY PTKGRATQGV VSIKVSERNG
PVVGAVQVEE GDEMMMITDA GTLVRTRVAE VSQVGRNTQG VTLIRTAEDE SVVGLQRIDE
VEEVELPEGE EAEATEANAE GQAPEAPADD AAEGSEEE