Gene VIBHAR_02080 details

Gene Information

• Locus tag: VIBHAR_02080
• ID: 5554810
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 2080192
• End bp: 2080692
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640907567
• Product: hypothetical protein
• Protein accession: YP_001445272
• Protein GI: 156974365
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGGTG AAATTCGTGG CGTTCGTGAA GTTCGACTAA CTGGCGCTGA CGGTGAATCA 
GTTGGTGTTG TATCTATTCA AGAAGCGATC GCAGCTGCTG AAGAAGCAGG CATGGATCTT 
GTGGAAATCA GTCCTAACGC TGAGCCGCCA GTCTGTCGTG TTATGGACTA CGGCAAATTC 
CTCTTTGAAA AGAGCAAATC TGCTAAAGAG CAGAAGAAAA AGCAAAAGCA GGTTCAGATT 
AAGGAAGTAA AATTCCGTCC TGGAACTGAT ATTGGAGACT ATCAGGTAAA ACTACGCAAC 
CTGACGCGTT TCCTTGAAGA AGGCAACAAA GTGAAGGTAA CAATTCGCTT CCGTGGCCGA 
GAAATGGCAC ACCAAGACAT CGGTGTTGAC GTTCTTCATC GCTTGAAAGA AGACACTGTA 
GACTTAGCTG TAGTGGAATC TTTTCCAAGT AAGATCGAAG GTCGTCAGAT GATCATGGTT 
CTTGCCCCTA AAAAGAAGTA A 

 

Protein sequence

MNGEIRGVRE VRLTGADGES VGVVSIQEAI AAAEEAGMDL VEISPNAEPP VCRVMDYGKF 
LFEKSKSAKE QKKKQKQVQI KEVKFRPGTD IGDYQVKLRN LTRFLEEGNK VKVTIRFRGR 
EMAHQDIGVD VLHRLKEDTV DLAVVESFPS KIEGRQMIMV LAPKKK