Gene VIBHAR_01421 details

Gene Information

• Locus tag: VIBHAR_01421
• ID: 5552910
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1438999
• End bp: 1440858
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640906912
• Product: peptidyl-prolyl cis-trans isomerse
• Protein accession: YP_001444623
• Protein GI: 156973716
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0760] Parvulin-like peptidyl-prolyl isomerase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGATC GACTACGCGA AGGCGTGAAT AGCATCGCGG TCAAAATTAT CCTTGGACTT 
ATAATCCTTT CTTTCGTATT TGCTGGTGTA GGAAGCTACA TCGTTGGTGG TAACAACAAC 
GCAGCGGCGA AAGTAGGTAA CACCGAGATT GCTCGTGGTG AGTTCGAGAT GGCTTACCAA 
AATGAGCGTA ACCGCATGCA AGCTCAATTG GGTGATTACT TCTCTCAAAT GCTGGCTGAC 
CCTGCATACG TTGAATCTTT CCGCAAATCT GTTCTAGATC GTATGATCAA TGACGTGCTG 
CTTGACCAAC AAGCAGAGGC ACTTGGCCTG CGCATTAGCG ATGCTCAGGT ACGTAGCATG 
ATTCTAGATA TGCCTCAGTT CCAATCGAAC GGGAAATTCG ACCAAGAGAT CTACCAAGCA 
TCTCTGCGTC GTGCAGGTTT CTCTCCAGAT TCTTTTGCTG AGTACATGCG TCGTGAATTG 
GTTCGTGAGC AACTGTTGAA CGCACTACAA ACCAGTGAAT TCACTCTACC TGGCGAAGTT 
CAATCTGAAG GTAAATTGTT CACTCAGACT CGTGACGTTC GCACGATCAC TATCGATTTG 
AATGAGTTTG CTAAGAAGGT AGATCTGACT GACGAAGAAA TTCAAGACTA CTACAAAGCA 
AACCCAGAAA TGTTCACTCG TCCTGAGCAA GTTAAGGTTG CTTACATTGA GCTTTCAGCT 
GACGAGCTTA AGAAGCAAAT CCAAATTTCT GACGAAGACG TTAAGAAATA CTACGATGAG 
CACCTAGACA AATACTCTAC AGAAGAGCAG CGTCGCGTAG CACACATCCT TGTTGAGGGT 
GATGATGAGG CGAAAGCACA AGCGATTCTT GACGAGCTAA ACGGTGGTGC TGACTTCGCT 
AAACTAGCAG AAGAAAAATC AAACGACTTT GGTAGCGCGG AAAACGGCGG TGACCTAGGT 
TGGATTGAAC GCGACGTGAT GGATCCTGCA TTCGAAGAGG CAGCATTCGC ACTTAAGAAC 
CCTGGTGATA TCACAGGTCT AGTGAAGTCT GACTTCGGCT ACCACATCAT CAAGCTAGAA 
GAGCTTAAAG GTGCGGTTGC TAAGCCGTTC TCTGAAGTAG CAGCTGAAAT CAAACAAGAA 
ATGGTTGACC AGAAAGCGGT TGATCAATTC TACGAACTGC AAAACGAACT TGAGAAAGTG 
GCGTTTGAAT ACCCAGATTC TCTAGACGAT GCTTCTAAAG CCGTTGGTCA GAAAGTGAAG 
ACAACGGACT TCATCTCTCA AGTTGATGCG CCTGAGGTTA TTAAGAACCA AGCGGTAATG 
CAAGCAATCT TGAGCCCAGA AGTGAAAGAA GATGGTCTGA ACTCTGAAGC TATCGAAGTG 
GCGCCAGAGC ACATCATCGT CGTTCGTGTT GAAGATGCTC GTGACGAGAC GGTTCTTCCT 
CTTGCTGACG TGAAAGACCA AGTGGTTGCT GAACTGTCTC GCGTTAAAGG TGAGCAAGGT 
GCAATTGAAC TAGGTACTAA AGTTGTCGCG GCTCTGAAAG ATGGCAACAA AGACATTCTT 
GCAGAAAACA ACCTAGCGTT TGGTGAGCAA GATTCTGTTG ATCGTCGTTC TCCACTCGCT 
GCAACAGTAT TCGCTATGGC GAAACCTGAA GGTGACAAGC CTGTATACGG TCAATCTAAA 
GATCTAGACG GTAACGTTGT GGTTATAGAG CTTGATGCGG TACACGCAGA GCTAGACAGT 
ACGCTAGAAG AGCAAGTTGC GATGCAAATG CAACGTGCTT CGTCTCAACA AGATCTTACT 
TCGGTAATTG CAGTACTGCG CGCAAACACT GACATTGAGT ACTTTGTTGT GAGCAACTAA 

 

Protein sequence

MMDRLREGVN SIAVKIILGL IILSFVFAGV GSYIVGGNNN AAAKVGNTEI ARGEFEMAYQ 
NERNRMQAQL GDYFSQMLAD PAYVESFRKS VLDRMINDVL LDQQAEALGL RISDAQVRSM 
ILDMPQFQSN GKFDQEIYQA SLRRAGFSPD SFAEYMRREL VREQLLNALQ TSEFTLPGEV 
QSEGKLFTQT RDVRTITIDL NEFAKKVDLT DEEIQDYYKA NPEMFTRPEQ VKVAYIELSA 
DELKKQIQIS DEDVKKYYDE HLDKYSTEEQ RRVAHILVEG DDEAKAQAIL DELNGGADFA 
KLAEEKSNDF GSAENGGDLG WIERDVMDPA FEEAAFALKN PGDITGLVKS DFGYHIIKLE 
ELKGAVAKPF SEVAAEIKQE MVDQKAVDQF YELQNELEKV AFEYPDSLDD ASKAVGQKVK 
TTDFISQVDA PEVIKNQAVM QAILSPEVKE DGLNSEAIEV APEHIIVVRV EDARDETVLP 
LADVKDQVVA ELSRVKGEQG AIELGTKVVA ALKDGNKDIL AENNLAFGEQ DSVDRRSPLA 
ATVFAMAKPE GDKPVYGQSK DLDGNVVVIE LDAVHAELDS TLEEQVAMQM QRASSQQDLT 
SVIAVLRANT DIEYFVVSN