Gene VIBHAR_00798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00798 
Symbol 
ID5556399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp782394 
End bp783365 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content46% 
IMG OID640906292 
Productoctaprenyl-diphosphate synthase 
Protein accessionYP_001444026 
Protein GI156973119 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA AAACTATCCA AGCGCTTACT GCCGATGACA TGGCAAAAGT GAATGAAACA 
ATTCAAGCCC AACTAAATTC TGATGTCTCT TTAATCAACC AGCTCGGTTT CTATATCGTA 
AGTGGTGGAG GCAAACGCTT AAGACCACTT CTGGCGATAT TGTCAGCACG TGCTCTTGGT 
TACCAAGGTA ACGGCCATAC TATGGCGGCG GCGTTTATCG AGTTCATCCA TACAGCCACT 
CTGCTGCACG ATGATGTAGT TGATGAGTCA GACATGCGTC GTGGTAAAGC GACGGCGAAC 
GCTGCATTTG GTAATGCGGC GAGCGTATTA GTTGGGGACT TTATTTACAC TCGCTCATTC 
CAAATGATGA CTGAGCTAGG ATCAATGAAG ATCCTTAAAC TAATGAGTGA TGCAGTAAAT 
GTGATCGCAG AAGGTGAAGT TCAGCAGTTA ATGAACTGCA ATGATCCTGA CACCACTGAA 
GAAAGCTACA TGCAGGTCAT CTACTCGAAA ACGGCTCGTC TGTTTGAGTC GGCAACGCAA 
ATTGGTGCGA TCTTAAATGA CGCACCAGAA AACGTAGAAG TTGCGCTGCA AAACTACGGT 
AAATATCTGG GTACCGCATT CCAACTTATC GATGACGTTA TGGACTATAC GTCTGACGGT 
GAAGACATGG GTAAGAATGT TGGCGACGAC CTAGCAGAAG GCAAACCAAC GCTCCCTCTT 
TTGCATGCGA TGCGTAATAC AACGCCAGAG AACACAGCGA TGATTCGTGA AGCAATCGAG 
AAAGCCAACG GCATGGATCG ATTAGAAGAC ATCTTAGCAG TCATGCAAGA AGCTGGTTCT 
CTTGAGTACA CGACACAAAA AGCACTAGAA GAAGCTGATA AAGCGATTGC TGAACTGTCT 
GTACTGCCTG AATCCGATTA TAAGCAAGCA TTGGTTACTC TCGCTCACAT GGCCGTGAAG 
CGAACTAGCT AA
 
Protein sequence
MDFKTIQALT ADDMAKVNET IQAQLNSDVS LINQLGFYIV SGGGKRLRPL LAILSARALG 
YQGNGHTMAA AFIEFIHTAT LLHDDVVDES DMRRGKATAN AAFGNAASVL VGDFIYTRSF 
QMMTELGSMK ILKLMSDAVN VIAEGEVQQL MNCNDPDTTE ESYMQVIYSK TARLFESATQ 
IGAILNDAPE NVEVALQNYG KYLGTAFQLI DDVMDYTSDG EDMGKNVGDD LAEGKPTLPL 
LHAMRNTTPE NTAMIREAIE KANGMDRLED ILAVMQEAGS LEYTTQKALE EADKAIAELS 
VLPESDYKQA LVTLAHMAVK RTS