| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004040 |
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| Symbol | |
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| ID | 8557779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2695304 |
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| End bp | 2697163 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407141 |
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| Product | peptidyl-prolyl cis-trans isomerase PpiD |
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| Protein accession | YP_003286665 |
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| Protein GI | 262394811 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000192385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGATC GACTACGCGA AGGCGTGAAT AGCATCGCGG TCAAAATTAT CCTTGGGCTT
ATCATCCTGT CTTTCGTATT TGCAGGTGTA GGTAGCTACA TCGTTAGTGG TAACAACAAC
TCTGCAGCGA AAGTCGGTAA CACTGAGATT CCTCGTGGTG AGTTCGAGAT GGCATACCAA
AATGAGCGTA ACCGTATGCA AGCTCAGTTG GGTGACTACT TCTCTCAAAT GCTGGCTGAC
CCTGCATATG TTGAATCTTT CCGCAAATCC GTTTTAGATC GAATGATCAA TGACGTGTTG
CTTGACCAAC AAGCAGAAGC TTTAGGTCTG CGAATCAGCG ACACCCAAGT TCGTAGCATG
ATTCTAGACA TGCCTCAATT CCAATCTAAT GGTCAGTTCG ATCAAGAGAT CTATCAAGCT
TCTCTGCGTC GTGCAGGCTT TTCGCCAGAC TCTTTTGCTG AGTACATGCG TCGTGAATTG
GTTCGTGAAC AACTGCTGAA TGCACTACAA AACAGTGAAT TTATTCTGCC AGGTGAAGTA
CAGGCAGAAG GTAAGCTGTT CACTCAAACT CGTGATATTC GCACGATTAA AATCGACTTA
GCAGAGTTTG CGAAAAACAT TGAATTGACT GACGAAGAAA TTCAACAGTA CTACAAAGCA
AACCCTGACA ACTTTACTCG CCCAGAGCAG GTTAAAGTCG CTTATATCGA ACTGTCTGCT
GAAGCGCTAA AGGAACAAGT TAATGTTTCT GACGCTGAGG TGAAAAAGTA CTACGATGAG
CACTTAAACA AATATTCTTC AGAAGAGCAG CGCCGTGTCG CTCATATTCT TGTAGAAGGG
GACGATGAAG CAAAAGCGCA GGCTATCTTA GATGAGCTAA ATGCGGGAGC AGATTTTGCG
ACGCTTGCTC AAGAGAAATC TGACGATTTT GGCAGTGCTG AAAACGGCGG TGACTTAGGT
TGGATTGAGC GTGATGTGAT GGACCCTGCT TTTGAAGAAG CGGCATTTGC GTTGAAGAAT
CCAGGCGATA CGTCAGGTCT AGTAAAGTCG GACTTTGGTT ACCATATTAT CAAGCTTGAA
GAGCTAAAAG ACTCTGTGGC GAAGCCATTT GAAGAAGTAG CCGCTGAAAT AAAACAAGAA
ATGGTTGACC AACAAGCAGT TGATCAATTC TACGAGCTAC AAAGCGAGCT TGAGCGCGTA
GCGTTTGAAT ACCCAGACTC ATTGTATGAC GCTTCTCAAG CGGTTAACCA AGAAGTGAAG
ACAACGGACT TTATTTCTCA AGTTGACGCA CCTGAAGTGC TTCGTAACCC TGCGGTAATG
CAAGCTATCC TTAGCCCAGA AGTAAAAGAA GATGGCTTAA ACTCTGAAGC TATCGAAGTT
GCACCTGAAC ATATTATTGT TGTTCGTGTT GAAGACGCAC GTGATGAGAC GGTTCTTCCA
CTAGAAGAAG TGAAAGATCA GGTTATTGCA GAGCTATCTC GCGTTAAGGG TGAGCAAGAT
GCGATGGAAC TTGGTACACA GGTTGTTGCT GCATTGAAAG AAGGTAAGAC AGATGTGCTT
ACTGAAAACA ACCTTGCATT TGGTGAACAA GAGACAGTAG ATCGCCGTTC TCCGTTGGCA
ACAACGGTAT TCGCGATGGC AAAACCAGTC GATGGTAAGC CAGTATATGG TCAGTCTAAA
GATCTTGAAG GTAACATTGT TATCATCGAG CTTGATGCTG TAAATGCTGA GCTAGATAGT
GATTTAGAAG AGCAAGTTGC GATGCAAATG CAGCGAGCAT CTTCTCAGCA AGACCTATCA
TCTGTGCTAG CTGTACTGCG CGCAAACACT GACATTGAGT ACTTTATTGT GAGCAACTAA
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| Protein sequence | MMDRLREGVN SIAVKIILGL IILSFVFAGV GSYIVSGNNN SAAKVGNTEI PRGEFEMAYQ
NERNRMQAQL GDYFSQMLAD PAYVESFRKS VLDRMINDVL LDQQAEALGL RISDTQVRSM
ILDMPQFQSN GQFDQEIYQA SLRRAGFSPD SFAEYMRREL VREQLLNALQ NSEFILPGEV
QAEGKLFTQT RDIRTIKIDL AEFAKNIELT DEEIQQYYKA NPDNFTRPEQ VKVAYIELSA
EALKEQVNVS DAEVKKYYDE HLNKYSSEEQ RRVAHILVEG DDEAKAQAIL DELNAGADFA
TLAQEKSDDF GSAENGGDLG WIERDVMDPA FEEAAFALKN PGDTSGLVKS DFGYHIIKLE
ELKDSVAKPF EEVAAEIKQE MVDQQAVDQF YELQSELERV AFEYPDSLYD ASQAVNQEVK
TTDFISQVDA PEVLRNPAVM QAILSPEVKE DGLNSEAIEV APEHIIVVRV EDARDETVLP
LEEVKDQVIA ELSRVKGEQD AMELGTQVVA ALKEGKTDVL TENNLAFGEQ ETVDRRSPLA
TTVFAMAKPV DGKPVYGQSK DLEGNIVIIE LDAVNAELDS DLEEQVAMQM QRASSQQDLS
SVLAVLRANT DIEYFIVSN
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