| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002970 |
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| Symbol | |
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| ID | 8556700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1512345 |
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| End bp | 1513310 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406063 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_003285597 |
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| Protein GI | 262393743 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGA AACGTTTATT AGCCACTGCC GTTCTATCTG CTACTGCTAT TTTCTCTTCT
GCCAATGTAC TGGCCGCCAC TGCAACCGTT GCAGTTTCAC AAATTGTCGA ACACCCCGCG
TTAGACGCGA CGCGTCAAGG ATTGCTTGAT GGTTTAAAAG CGAAAGGCTA CGAAGAAGGC
AAAAATCTAG AATTTGATTA TAAGACCGCA CAGGGTAACC CTGCGATTGC AGTGCAAATT
GCCCGTCAGT ACGTCGGCGA AAATCCTGAT GTGTTAGTGG GTATCGCGAC GCCTTCGGCA
CAAGCCTTGG TGTCGGCAAC GCGCTCTATT CCTGTTGTCT TTACTGCGGT AACAGACCCG
GTCGGTGCGA AATTGGTTAA GTCGATGGAA CAACCAGGCA AAAACGTAAC TGGCCTGTCT
GATCTTTCAC CCGTTGCTCA GCATGTCGAT CTCATCCAAG AAATTCTTCC TCAGGTGAAA
AGCATCGGGG TTGTATTTAA TCCAGGTGAA GCTAATGCCG TGACTTTGGT TGAATTGCTA
AAAGAAAGTG CAAAAGCAAA AGGCATACAA GTGGTTGAAG CGACCGCCCT AAAAAGTGCT
GATGTTCAGT CTGCGACTCA AGCCATTGCA GCTAAATCAG ATATTCTTTA CGCCCCAACA
GACAATACAG TTGCAAGTGC GATTGAAGGG ATGATTGTGG CAGCGAATCA AGCTAAAAAA
CCTGTCTTTG GTGGTGCGAC GTCATATGTC GAAAAAGGAG CAATTGCAGG CTTAGGTTTT
GACTACTACC AGGTTGGTGT GCAAACCGCT GATTACGTGG CGGCGATTCT TGATGGTCAA
GAACCAGGCA AATTGGATGT AAAAGTCGCG ACGGGCTCTG ACCTCGTAAT TAATGAAAGC
GCGGCATCTA AGCTCGGTAT CAAGCTGCCA AGTTCTGTGG TTGAACGTGC GACAAGCATG
CAATAA
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| Protein sequence | MKTKRLLATA VLSATAIFSS ANVLAATATV AVSQIVEHPA LDATRQGLLD GLKAKGYEEG
KNLEFDYKTA QGNPAIAVQI ARQYVGENPD VLVGIATPSA QALVSATRSI PVVFTAVTDP
VGAKLVKSME QPGKNVTGLS DLSPVAQHVD LIQEILPQVK SIGVVFNPGE ANAVTLVELL
KESAKAKGIQ VVEATALKSA DVQSATQAIA AKSDILYAPT DNTVASAIEG MIVAANQAKK
PVFGGATSYV EKGAIAGLGF DYYQVGVQTA DYVAAILDGQ EPGKLDVKVA TGSDLVINES
AASKLGIKLP SSVVERATSM Q
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