Gene VEA_002804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002804 
Symbol 
ID8556532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1331196 
End bp1332329 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content47% 
IMG OID646405895 
Productflagellin protein FlaF 
Protein accessionYP_003285431 
Protein GI262393577 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGATCA CCGTTAATAC CAATGTTGCA GCACTTGTTG CACAACGTCA TTTGACCAGT 
GCAACTGACA TGCTGAACCA ATCCATGGAG CGTTTGTCTT CAGGGAAGCG TATTAACAGC
GCAAAAGATG ACGCGGCAGG TCTGCAAATC TCCAACCGTC TGCAATCGCA AATGCGCGGT
TTGGATGTCG CGGTACGTAA CGCGAATGAC GGTATTTCCA TCATGCAAAC CGCCGAAGGG
GCGATGAATG AGGTGACCAA TATCATGCAA CGTATGCGTG ATTTGTCGCT TCAATCTGCT
AACGGTTCAA ACAGCAAAGC GGAACGCACT GCACTGCAAG AAGAAGTGAC GGCACTTAAC
GATGAGCTAA ACCGCATTGC CGAAACGACC TCCTTTGGTG GGCGTAAACT GCTCAATGGC
AGCTTTGGTA AGTCGGCATT TCAAATCGGT GCAGCGTCAG GTGAAGCTGT GCAAGTTGAA
TTAAAGTCGA TGCGCAGTGA TGGCATTGAT ATGGGCGGCT TTAGTTACAT TGCAAACGGA
CGTGCAAGCT CTGATTGGAA AGTAAAAGAC GGTGCGAATG ATCTTAGTAT GTCATTTACG
AATCGTTTTG GTGAGACGGA AACCATTCAA ATTAATGCCA AAGCTGGCGA TGATATCGAA
GAGCTTGCGA CTTATATCAA TGGTCAAACT GACAAAGTCA CGGCATCGGT GAATGAAGAA
GGTCAGTTAC AGCTATTTAT GGCTGGAGAA GAAACTTCAG GCACTTTATC GTTTTCAGGT
GACTTAGCGA GTGAACTGGG GTTACAGCTA AAAGGTTACG ATGCGGTTGA TAACATCGAC
ATTACGTCTG TTGGTGGTGC GCAACAAGCC GTGGCCGTCC TAGATACTGC GATGAAGTAC
GTTGATAGCC ATCGTGCTGA GTTAGGCGCG TATCAAACCC GCTTTAATCA CGCGATCAAT
AATCTCGATA ACATCCACGA AAACTTAGCC GCTTCCAACA GTCGTATCCA AGACACTGAC
TACGCGAAAG AAACCACGCA AATGGTGAAG CAGCAGATCT TGCAGCAGGT CAGTACTTCT
ATTCTTGCAC AAGCAAAACA AGCGCCCAAC CTAGCATTAA CCTTACTTGG CTAA
 
Protein sequence
MAITVNTNVA ALVAQRHLTS ATDMLNQSME RLSSGKRINS AKDDAAGLQI SNRLQSQMRG 
LDVAVRNAND GISIMQTAEG AMNEVTNIMQ RMRDLSLQSA NGSNSKAERT ALQEEVTALN
DELNRIAETT SFGGRKLLNG SFGKSAFQIG AASGEAVQVE LKSMRSDGID MGGFSYIANG
RASSDWKVKD GANDLSMSFT NRFGETETIQ INAKAGDDIE ELATYINGQT DKVTASVNEE
GQLQLFMAGE ETSGTLSFSG DLASELGLQL KGYDAVDNID ITSVGGAQQA VAVLDTAMKY
VDSHRAELGA YQTRFNHAIN NLDNIHENLA ASNSRIQDTD YAKETTQMVK QQILQQVSTS
ILAQAKQAPN LALTLLG