Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002770 |
Symbol | |
ID | 8556498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1299317 |
End bp | 1300075 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646405861 |
Product | hydroxyacylglutathione hydrolase |
Protein accession | YP_003285397 |
Protein GI | 262393543 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.18088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAGAGA TCAAAAGCAT ACCCGCATTT AATGATAATT ACATCTGGCT GATACAAAAT AGCGATAAGC GTTGCGCAGT CGTTGATCCG GGCGATGCGA AGCCAGTGTT AGAATACTTG CAGGCTAACG AATTAACTTT AGAAGCGATT TTAATTACGC ACCACCACAA CGATCACATT GGTGGCGTTC CAGACTTAGT GCGTGCCTTT CCTGAAGTCG CCGTTGTGGG CCCGAAATCT GAGCCAATTC CAACCCTAAC CACCCCCATG GAAGAAGGCG ACAAACTGGA GTTATTTGGC GAAATCTTTT TGGTGCTAGG TTTACCAGGC CATACCTTAG GTCATATCGG TTACGTTGGA GACGGAAAAC TGTTTTGCGG TGACGTGTTG TTTTCCGCAG GCTGCGGTCG TATTTTTGAA GGTACGCCAG AGCAAATGTT TGAGTCACTT AACAAACTAA CGTCTCTACC AGAAGAAACT CAAGTTTTCT GCGCGCATGA ATACACCGCG AGTAACGTGG CGTTTGCTTT AGCGGTTGAG CCTGATAATG AGCAGCTCCG TCAATATCGC GATGATGTAA ACCGACTGCG AGCCCTAAAC ATTCCGACAC TTCCAACAAC AATACGCAAA GAAAAGTGGA TTAATCCGTT CTTGCGAACC ACCAACCCTG ACGTGGTTCA ATCTGTTGCT AGTCGCATTA AAAATAGCGA TCCATGCTCG GTTTTTACTG CTTTGCGTGA GTGGAAGAAC GAATTTTAA
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Protein sequence | MLEIKSIPAF NDNYIWLIQN SDKRCAVVDP GDAKPVLEYL QANELTLEAI LITHHHNDHI GGVPDLVRAF PEVAVVGPKS EPIPTLTTPM EEGDKLELFG EIFLVLGLPG HTLGHIGYVG DGKLFCGDVL FSAGCGRIFE GTPEQMFESL NKLTSLPEET QVFCAHEYTA SNVAFALAVE PDNEQLRQYR DDVNRLRALN IPTLPTTIRK EKWINPFLRT TNPDVVQSVA SRIKNSDPCS VFTALREWKN EF
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