Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001891 |
Symbol | |
ID | 8555520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 279339 |
End bp | 280841 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646404884 |
Product | general secretion pathway protein E |
Protein accession | YP_003284519 |
Protein GI | 262392665 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTGATA TGTTAGACAC AGCGCCAAGT ATGCGTCGTC TGCCATTCAG TTTTGCCAAT CGCTTTAAAC TGGTGCTGGA GACAGAGCAT CCTGAGCGTC CGCCCATTCT TTACTATGTC GAGCCGCTCA ACCCAGCGGC TCTGGTCGAA GTCCGTCGTG TGCTGAAGAA AAGCTTCGTA CCGCAGCCTA TCGATAAAGA AGCCTTTGAT AAAAAGCTGA CCGAAGCATA TCAACGTGAC TCGTCTGAAG CGCGTCAATT GATGGAAGAC ATCGGTGCCG ATAGCGACGA CTTTTTCTCA TTGGCTGAAG AGCTGCCGCA TGATGAAGAC TTGCTAGAGT CAGAAGACGA TGCACCAATC ATTAAGTTGA TCAATGCGAT GTTGGGTGAA GCAATTAAAG AAGGGGCGTC GGATATTCAT ATCGAAACTT TCGAGAAAAC CCTTTCGATT CGTTTCCGTG TCGATGGCGT ATTGCGTGAA GTGCTCACTC CAAGTCGTAA GCTTGCACCA CTGTTAGTGT CGCGAGTGAA GGTCATGGCG AAGCTGGATA TTGCAGAAAA GCGTGTACCT CAAGATGGTC GTATCTCGTT GCGTATTGGT GGTCGTGCGG TTGATGTGCG TGTTTCTACA ATGCCGTCGT CACATGGTGA GCGAGTAGTT ATGCGTCTGT TGGATAAAAA CGCGACGCGT CTCGATTTGC ATAGCTTAGG TATGACGCCG TCCGTACACG ACAATTTCCG TCATCTTATT CAGCGTCCTC ACGGTATCAT CTTGGTCACC GGCCCGACGG GTTCTGGTAA GTCGACGACT TTGTACGCTG GCTTGCAAGA GATCAACAGT AACGAACGCA ATATCTTAAC GGTTGAAGAC CCGATCGAAT TTGATATTGA TGGCATCGGT CAGACTCAGG TGAACCCGAA GGTCGACATG ACTTTTGCGC GTGGCTTGCG TGCTATTCTG CGTCAGGACC CTGACGTGGT GATGGTCGGT GAGATCCGTG ACTTAGAAAC CGCACAAATT GCAGTGCAAG CGTCCTTAAC GGGTCACTTA GTAATGTCGA CCCTTCACAC CAACACCGCT GTTGGTGCGA TCACGCGTCT ACGCGATATG GGCATTGAAC CATTCCTTAT TTCTTCATCG TTATTGGGTG TGTTAGCACA GCGCTTGGTT CGTACGCTTT GCCCAAGTTG TAAAGAACCG TATGAAGCCG ATGCTGAACA GAAGAAACTG TTTGGTATGG AAGCACATGA ACCACTAGAG CTACACCGTG CTAAAGGCTG TGAAGCGTGT AACCAAAAAG GCTACCGAGG TCGAACAGGT ATCCACGAGC TCATTATGGT CGATGAGCAA GTGCAAGAAT TGATTCACCG AGAGTCTGGT GAGCAAGAAA TTGAGAGAGC TGTTCGCGCT CATACGCCAA GTATTCGCAG TGATGGTCTA AGCAAAGTAC GTCGTGGTAT TACGTCACTT GAAGAAGTGA TGCGAGTGAC GAAGGAAACC TAA
|
Protein sequence | MVDMLDTAPS MRRLPFSFAN RFKLVLETEH PERPPILYYV EPLNPAALVE VRRVLKKSFV PQPIDKEAFD KKLTEAYQRD SSEARQLMED IGADSDDFFS LAEELPHDED LLESEDDAPI IKLINAMLGE AIKEGASDIH IETFEKTLSI RFRVDGVLRE VLTPSRKLAP LLVSRVKVMA KLDIAEKRVP QDGRISLRIG GRAVDVRVST MPSSHGERVV MRLLDKNATR LDLHSLGMTP SVHDNFRHLI QRPHGIILVT GPTGSGKSTT LYAGLQEINS NERNILTVED PIEFDIDGIG QTQVNPKVDM TFARGLRAIL RQDPDVVMVG EIRDLETAQI AVQASLTGHL VMSTLHTNTA VGAITRLRDM GIEPFLISSS LLGVLAQRLV RTLCPSCKEP YEADAEQKKL FGMEAHEPLE LHRAKGCEAC NQKGYRGRTG IHELIMVDEQ VQELIHRESG EQEIERAVRA HTPSIRSDGL SKVRRGITSL EEVMRVTKET
|
| |