| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2553 |
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| Symbol | |
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| ID | 5137802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2703212 |
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| End bp | 2704318 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640534002 |
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| Product | hypothetical protein |
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| Protein accession | YP_001218437 |
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| Protein GI | 147673467 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000355433 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT GGACATTTTT TATGTTGCTT ATCGCGATCC TGCTGTTTGG CAGCGTGATA
GGTTTCAATC TTTTCAAACA ACAGAAAATT GCCGAGTACC TCGCCAATCG TCCTGAGCCA
GAATTTCCGG TTACCGTAGT GACCGCCAAT CCGGTTGATT GGGTACCCGT GATTGAAGCG
ATCGGTTTTA TTGAGCCGAA TCAAGGTGTG ACATTAACGA CCGAAACAGC AGGGGTGATT
GACCAAATTA CGTTTGAATC GGGCACGCAA GTCGCAAAAG ACCAACCTCT AGTGCTACTG
GATTCAGCGG TAGAACGAGC CAATTTAAAA AGCACTGAAG CGCGCCTGCC TGCAGCGAAA
GCCAAATATG AACGCTACAA GGGTCTGTTC GCTAAAGGTT CTATCTCTAA AGAGTCTTAT
GATGAAGCAG AAGCGAGCTA CTATGCGCTC TCCGCTGATA TTGAAAGCCT AAAAGCCACC
ATTGCTCGCC GTGAAATCAA AGCGCCTTTT GCTGGTGTGA TCGGTATTCG TAATGTGTTC
TTAGGTCAAT ATTTGCAGCC TGGTACAGAT ATTGTGCGCT TGGAAGATAC CAGCGTGATG
CGTCTGCGTT TTACCGTGCC ACAAAGAGAT ATTTCGCGTA TTTCACTGGA TCAAGAAGTC
GATATTTTTG TGGATGCTTA TCCACAGACT TCATTTAAAG GCTCCATCTC AGCGATTGAA
CCTGCAGTGA GCGTACAAAG CGGCCTGATC CAAGTGCAAG CGGATATCCC AAATAGTGAT
GGCAAACTGC GAAGCGGTAT GTTCGCGCGT GCCAACATCA TTCTGCCTAA GCTGGAAAAC
CAAGTCACTC TGCCGCAAAC CGCGATTACC TATACCCTCT ACGGTGACAA TGTTTACATT
GTCAGCGAAG AAAATGGTGA GAAGCGCGTC CAGCAACATG TCGTGAAAGT GGGTGAGCGC
TCTGAATCTA TTGCTCACAT TCTGGAAGGC GTAAAACCGG GTGATGTGGT TGTCACGACA
GGTCAAGTAC GTCTGAGTAA CGGTGCTAAA GTTCGTATCG TCGAAAGTGA TGCGACTACA
CCACCAGCAG AAACCCCAAT GCTGTAA
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| Protein sequence | MKKWTFFMLL IAILLFGSVI GFNLFKQQKI AEYLANRPEP EFPVTVVTAN PVDWVPVIEA
IGFIEPNQGV TLTTETAGVI DQITFESGTQ VAKDQPLVLL DSAVERANLK STEARLPAAK
AKYERYKGLF AKGSISKESY DEAEASYYAL SADIESLKAT IARREIKAPF AGVIGIRNVF
LGQYLQPGTD IVRLEDTSVM RLRFTVPQRD ISRISLDQEV DIFVDAYPQT SFKGSISAIE
PAVSVQSGLI QVQADIPNSD GKLRSGMFAR ANIILPKLEN QVTLPQTAIT YTLYGDNVYI
VSEENGEKRV QQHVVKVGER SESIAHILEG VKPGDVVVTT GQVRLSNGAK VRIVESDATT
PPAETPML
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