| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1779 |
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| Symbol | flaC |
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| ID | 5135095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1886309 |
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| End bp | 1887442 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533236 |
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| Product | flagellin |
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| Protein accession | YP_001217704 |
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| Protein GI | 147675419 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1344] Flagellin and related hook-associated proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000663504 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTGA ATGTAAACAC CAACGTGTCA GCAATGACAG CACAACGGTA CTTGACGAGT
GCAACCAATG CACAACAATC GTCAATGGAA CGTCTATCTT CAGGATACAA AATTAACAGC
GCAAAAGACG ATGCGGCCGG TCTGCAGATC TCTAACCGCT TGAACGTGCA AAGCCGAGGT
TTAGGTGTCG CCGTTCGTAA CGCCAACGAT GGTATTTCGA TGGCGCAAAC CGCGGAAGGG
GCAATGAAAG AGACCACCAA CATCTTACAA CGTATGCGTG ATCTCTCCTT GCAATCAGCA
AACGGTTCGA ACTCAAAAGC TGACCGTGTT GCGATTCAAG AAGAAATTAC CGCGTTGAAT
GATGAGCTTA ATCGTGTGGC CGAAACCACC TCTTTCGGAG GTAACAAGCT GCTCAACGGT
ACATTCGCAA CCAAATCATT CCAGATTGGT GCGGATAACG GTGAAGCGGT AATGCTTAAC
ATCAAAGATA TGCGCAGCGA TAACGCTTTG ATGGGAGGTA AAACCTATCA AGCGGCTAAC
GGTAAAGACA AAAACTGGGG CGTGGAAGCG GGTAAAACCG ATCTGACCAT CACTCTGAAA
GACAAACGCG AAGGCGATGT CACCATTTCG ATCAATGCGA AAGAAGGGGA TGATATCGAA
GAGCTGGCCA CTTACATCAA CGGTCAAACC GACATGATCA AAGCATCGGT GGATGAAGAA
GGTAAGTTAC AGCTATTCAC TGATAACAAC CGAATCGATG GTGCTGCGAC CTTTGGTGGC
GCACTTGCCG GTGAGTTAGG TATCGGTGCT GCGCAAGACG TGACGGTTGA TACTCTGGAT
GTCACTACGG TTGGTGGTGC ACAAGAGAGT GTGGCGATTG TCGATGCTGC CTTGAAATAT
GTGGATAGCC ATCGTGCTGA ACTCGGTGCA TTCCAAAACC GATTCAACCA CGCTATCAAC
AACTTAGATA ACATTAACGA AAACGTGAAT GCGTCTAAGA GCCGGATCAA AGATACAGAC
TTTGCCAAAG AAACGACTGC ACTGACCAAG GCGCAGATCC TTTCTCAAGC ATCAAGTTCT
GTTCTCGCAC AAGCCAAGCA GGCACCCAAC TCAGCACTGG CTCTTCTAGG CTAG
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| Protein sequence | MAVNVNTNVS AMTAQRYLTS ATNAQQSSME RLSSGYKINS AKDDAAGLQI SNRLNVQSRG
LGVAVRNAND GISMAQTAEG AMKETTNILQ RMRDLSLQSA NGSNSKADRV AIQEEITALN
DELNRVAETT SFGGNKLLNG TFATKSFQIG ADNGEAVMLN IKDMRSDNAL MGGKTYQAAN
GKDKNWGVEA GKTDLTITLK DKREGDVTIS INAKEGDDIE ELATYINGQT DMIKASVDEE
GKLQLFTDNN RIDGAATFGG ALAGELGIGA AQDVTVDTLD VTTVGGAQES VAIVDAALKY
VDSHRAELGA FQNRFNHAIN NLDNINENVN ASKSRIKDTD FAKETTALTK AQILSQASSS
VLAQAKQAPN SALALLG
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