| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1759 |
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| Symbol | ipk |
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| ID | 5135763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1879880 |
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| End bp | 1880752 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533216 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001217698 |
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| Protein GI | 147673745 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000124262 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCACG GCACAACCGT GTGGCCTTCA CCGGCCAAAC TCAACCTGTT CCTTTACATC
ACAGGTCGTC GAGCTAACGG CTATCACGAT CTGCAGACCT TGTTTCAGTT TCTCGATCAC
GGTGATGAGT TAACCATTAC CGCCAACAAC AGCGGCAACA TCACCCTCTC TCCTGCTCTG
GCCGATGTCG CGTTAGAAGA TAACCTGATT TACAAAGCCG CGATGGCACT CAAAAATGCG
GCGCAATCAC CACTCGGCGC AGACATTCAA CTGCACAAGG TGTTGCCTAT GGGCGGCGGA
ATTGGTGGCG GATCATCCAA TGCGGCCACT ACCTTAGTCG CACTCAATTA CTTGTGGCAA
ACTGGGCTTA GCGATGATCA ATTGGCTGAA ATTGGGCTGG CACTCGGAGC GGATGTCCCT
GTCTTTACTC GTGGTTTTGC GGCTTTTGCT GAAGGAGTTG GCGAAGAATT ATCCGCAGTA
GAGCCAGAGG AAAAATGGTA TCTCGTGGTT CGCCCTGCGG TCAGCATCGC GACAAAAGAT
ATTTTCACTC ATCCACAGCT GATGAGAAAC ACGCCAAAGC GTGATCTGGC AAGCCTTCTT
ACCACCCCGT ACGAAAACGA TTGCGAAAAA ATTGTCCGAT CACTGTACCC CGAGGTTGAT
AAGCAACTTT CATGGCTGCT ACAATACGCG CCGTCAAGAT TGACCGGGAC GGGATCTTGC
GTTTTTGCTG AGTTTTCGAG CAGGAAAGAT GCACAGGCCG TCTTTGCTCA ATTATCTGAC
AACGTCTTAG CGTTTGTCGC CCAAGGGCGC AATGTTTCAC CGCTCAGAAA GACGTTGGCT
GACTACCAAT CAGCTAAAAT CCGACCTTAC TAA
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| Protein sequence | MIHGTTVWPS PAKLNLFLYI TGRRANGYHD LQTLFQFLDH GDELTITANN SGNITLSPAL
ADVALEDNLI YKAAMALKNA AQSPLGADIQ LHKVLPMGGG IGGGSSNAAT TLVALNYLWQ
TGLSDDQLAE IGLALGADVP VFTRGFAAFA EGVGEELSAV EPEEKWYLVV RPAVSIATKD
IFTHPQLMRN TPKRDLASLL TTPYENDCEK IVRSLYPEVD KQLSWLLQYA PSRLTGTGSC
VFAEFSSRKD AQAVFAQLSD NVLAFVAQGR NVSPLRKTLA DYQSAKIRPY
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