| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0880 |
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| Symbol | |
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| ID | 5170521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 899405 |
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| End bp | 901144 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563398 |
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| Product | ABC transporter related |
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| Protein accession | YP_001244474 |
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| Protein GI | 148270014 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000184481 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTCCGG AGAAGTTTCT GCTAAGGTAC GCTAAAAAAT ACTGGTATCT TTTTCTTGCA
GGAACTGTGC TATCTCTGAT TCTCACAGTG CTGGAAGTCC TCCCACCCCG TTTGATGAAA
ACGGCGATAG ATAAGTTTCT TGTGGAAAGT ACTTTATCTT CGTTTGAGCG TTTGAACGGC
ATTGTAATAA CGGCCTTTAT AATTTTAGGA ATTCGCGTCC TTTCCTTTCT GGTGGGGTTT
GCGAGTTCTT ATGTAACAGG GTATGCAGGC TCAAAGATAG TCCTTCTGAT GAGAAAAGAC
GTGTTTTCCC ATGTCATTTC ACTTCCGTAT TCTTTTTTCA CAGGAATACC TTCCGGAGTA
GTTACCACCA GGATCGTTAA CGACACACAG AATATCCAGG AGTTCTTCTC TTCTGTTGTG
ACCAGTGTGA TTATGGATGT TCTCCTTTTG GGAGCGGTCG TTGTTTCTCT CATTCAGCTC
AGTCGAGAGC TTTTTGGCCA CGTCTATTAC CTTTTGCCTT TGATCGTCAT TTCGATCCTC
CTGTTCAGAT ACTTCGACAG GAGGGCTTAT CGCAAGGTCA GAACCAACCT CGCCCGCCTC
AACGCCTTCC TGGCAGAGCA CATAGCAGGT ATCAACGTGA TAAAAATCTT GAATCTGGAA
AAACACAAAG AAAAGGAGTT TTCCACAGTG GCCACAGAGT ATTACAGATC TCTGATGGAA
CAACTCTACG TTTTCGGAGT CTTTCGTCCT CTCATGGATT TTCTTTACTT TCTGGGAGTG
AGTCTTGTTT TGTGGTACGG TGCCAGGTAT ATCGCGAATA AAACCCTTGG ATTCGGTTCT
CTGTACGCTT TTGTATCTTA CCTCGATATG TTCTTCAGGC CTCTCAGAGA CCTTTCTGAG
AAGTACGATA TAATCCAGAA CTCCATGGCA TCCTCCGAGA AAATTTTGAA CCTCTTAAAA
GAAGAACCAG AGGTCATAGG AAATCCAAAT GGACCGAATA AGATTTCAAA AGGTCGTGTT
CGTTTTGAGA ACGTGTGGTT TTCGTACGAC GGAAAGAACT GGGTGCTGAA GGACATAAAC
TTGGATTTTC AACCAGGGAA ACTGTACGCG ATAGTGGGAG AAACAGGTGG TGGGAAATCC
ACTCTCATGA GCCTGATAAA CGGTCTTTAT ATACCGCAGA AGGGAAATAT ATTCATCGAT
GAGATTCCGC TTCTGGAGTA CAATTTAAAA CTCGTGAGAA AACAGATAGC AGCTGTCCCG
CAGGATGTTC TGTTGTTCAG CGGAACGATC CTCGATAACA TCAGGCTTTT CGATGAGAGC
ATACCAGAAG AACGAGTTCT CGAAGCACTG AAAAGAGTCC ATGCTCTGGA TATAATAGAG
AGGTTACCCG GAGGTGTTTA CTACGAAATA GTCGAAAGAG GAACCACTCT CTCAGCAGGC
GAAAGGCAAC TCATAGCGCT CGCAAGAGCC GTTTTGTTTG ACGCGAAGAT CTTCATTCTT
GATGAAGCGA CGAGCAACGT GGATGTTATA ACAGAGACGA AGATTCAGGA GGCTTTAGAA
GAGCTTTCAA AAGACAGGAC AGTGATAATG ATCGCACACA GACTCTCTAC TGTGAAAGAC
GTCGATGAGA TAGTGGTAGT CCACAATGGT AGGATTGTAG AGAAAGGCAA TCACTATGAA
CTGTTAGAGA AGAGAGGATT TTACTACAAC CTTTACAAGA TACAGTTCGA AAATGCGTAG
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| Protein sequence | MSPEKFLLRY AKKYWYLFLA GTVLSLILTV LEVLPPRLMK TAIDKFLVES TLSSFERLNG
IVITAFIILG IRVLSFLVGF ASSYVTGYAG SKIVLLMRKD VFSHVISLPY SFFTGIPSGV
VTTRIVNDTQ NIQEFFSSVV TSVIMDVLLL GAVVVSLIQL SRELFGHVYY LLPLIVISIL
LFRYFDRRAY RKVRTNLARL NAFLAEHIAG INVIKILNLE KHKEKEFSTV ATEYYRSLME
QLYVFGVFRP LMDFLYFLGV SLVLWYGARY IANKTLGFGS LYAFVSYLDM FFRPLRDLSE
KYDIIQNSMA SSEKILNLLK EEPEVIGNPN GPNKISKGRV RFENVWFSYD GKNWVLKDIN
LDFQPGKLYA IVGETGGGKS TLMSLINGLY IPQKGNIFID EIPLLEYNLK LVRKQIAAVP
QDVLLFSGTI LDNIRLFDES IPEERVLEAL KRVHALDIIE RLPGGVYYEI VERGTTLSAG
ERQLIALARA VLFDAKIFIL DEATSNVDVI TETKIQEALE ELSKDRTVIM IAHRLSTVKD
VDEIVVVHNG RIVEKGNHYE LLEKRGFYYN LYKIQFENA
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