| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0826 |
|---|
| Symbol | obgE |
|---|
| ID | 5170505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 840772 |
|---|
| End bp | 842079 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640563345 |
|---|
| Product | GTPase ObgE |
|---|
| Protein accession | YP_001244421 |
|---|
| Protein GI | 148269961 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0536] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA
[TIGR03595] Obg family GTPase CgtA, C-terminal extension |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.350132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACATAG AGAGAGCGGA TTTTGTTGAC AGAGTGAAAA TCTTCGTGAA AGCCGGTGAC
GGAGGAAACG GTTGTGTGAG CTTCAGAAGA GAGAAATACG TTCCAAAGGG CGGTCCTGAT
GGTGGAGACG GCGGCGATGG AGGGTTCGTC TTCCTCAGGG CCAATCCTTC TGTTTCCACA
CTGATAGAAT TTGTGAACAA AAGAAAATTC GTGGCGGAAA ACGGAAAACA CGGCATGGGA
AAGAAAATGA AAGGAAGAAA CGGTAAGGAT CTTTTCATAG ACGTGCCGGT AGGAACTGTG
GTCAAAGACG CCGTTACCGG AGAGATCATC GCTGATCTGA ACGAACCGGG AAAAATCGTG
TGTGTGGCGC GCGGTGGAAA GGGCGGAAGA GGGAACGCCC ATTTTGCAAC ATCCACAAAG
CAGGCTCCTT TGATAGCAGA ACGCGGCGAG AAAGGTGAGT CCAGATGGCT CGAACTTGAA
CTGAAGATAC TGGCAGATGT TGGACTCGTT GGATACCCGA ACGTGGGAAA GTCTTCCCTC
ATATCGCGCA TCAGCAACGC AAGACCCAAA ATAGCGAATT ATCCGTTCAC AACACTCATA
CCTAATCTGG GAGTGGTGAA ATACGATGAC TTCAGCTTTG TGGTAGCGGA CATTCCCGGT
CTCATCGAAG GTGCAAGTGA GGGTGTAGGT CTCGGAAACG TATTTTTGAG GCACGTTGAA
AGGTGCTACT TGATAGCCCA TGTGATCGAT GTGAGTGGCT ATGAGAGGGA AGATCCGGTG
AGAGATTACT TCGTCATAAG AGAAGAAATG AAGAAGTATT CTCCATTCCT TTTGGAGAAA
CCCGAGATAG TGGTTGCAAA CAAGATAGAC CTTATTGGTA AAGAAGAATT GGAGAAGATT
CTGAAGAGAC TGAGAGATGC TACCGACCGA GAGGTGATCC CTGTCTCTGC TGTGACAGGT
GAGGGAATAG ATCTGCTCGT TTCGAAGCTG GCCTCCATCG TCAGGGAAAT GAAGGTGGAG
AAACCAGAGA GAAAAGAAGA AAGATTCGTG AAGCCTTCAC CTGTCTGGAG GAGGCTTCCT
GAGAAGTTCC ATTTAGAAGT TGTCAAAGAA GATGAGGGAT ACTGGGTGGT TGAAGGAGAG
AACCTTAGAG TCTGGATAGA GAGATTCGAC CTGAATCAGA GGGATGCGAG ATTGATGCTT
TTACAGGTTC TGGAGAAAAA CGGTCTAAAC AATAAGTTGA AGGAAGCCGG GGTGAAGGAA
GGGGATGTTG TCAGGATCGG AGACTTCGAG TTTGAATACA GGGAATAG
|
|---|
| Protein sequence | MNIERADFVD RVKIFVKAGD GGNGCVSFRR EKYVPKGGPD GGDGGDGGFV FLRANPSVST
LIEFVNKRKF VAENGKHGMG KKMKGRNGKD LFIDVPVGTV VKDAVTGEII ADLNEPGKIV
CVARGGKGGR GNAHFATSTK QAPLIAERGE KGESRWLELE LKILADVGLV GYPNVGKSSL
ISRISNARPK IANYPFTTLI PNLGVVKYDD FSFVVADIPG LIEGASEGVG LGNVFLRHVE
RCYLIAHVID VSGYEREDPV RDYFVIREEM KKYSPFLLEK PEIVVANKID LIGKEELEKI
LKRLRDATDR EVIPVSAVTG EGIDLLVSKL ASIVREMKVE KPERKEERFV KPSPVWRRLP
EKFHLEVVKE DEGYWVVEGE NLRVWIERFD LNQRDARLML LQVLEKNGLN NKLKEAGVKE
GDVVRIGDFE FEYRE
|
|---|
| |