| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0417 |
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| Symbol | |
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| ID | 5171157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 403945 |
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| End bp | 404982 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640562917 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001244017 |
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| Protein GI | 148269557 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000046996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCAT ACATCATACG AAGACTTCTG CTCTTGCCCC TGATTCTCTT AGGAGTAACT
TTCATCGTCT TCTCGATGAT CCAGTCCCTC GGGCCGGATA AATTGCTCGC AGCGTACGTC
AACCCGAATA TGCTGGACAA ATTAACGACT GAGCAAATGG ATGCCCTGAA GGAAAAGTAC
GGTTTGAACG ACTTTTTCGT TGTGAGATAC GTCAAATGGC TCTCAAACAC TCTGAGAGGT
GATCTCGGGT GGTCCCTTGT TGGGAAAGAA CCGGTGAAAG ATGCTCTTTT GAGAAGACTC
CCATACACCG TTGAACTTGC GCTTTACGCC ATCTTCCCTG TTGTATTTGT TGGAATATGG
CTCGGTGTGA AGGCTGCGGT TCACAGAGGA AAATTCCTCG ATCATTTCAT AAGAATCTTC
GCCGTGGTTG GCTGGTCTTT TCCTGATTTC GTCTTTGGAT TGCTCGTTCT GATGATCTTC
TACAGCATAC TGAACTGGCT TCCTCCTGGG AATCTGAGTA TGTGGGCTGA AGAAGTGATC
AAATCTCCGG AGTTTCATCG CTACACAAAG CTCGTTACAA TAGACGCACT TTTGAACGGC
AGACTGGACA TCTTCTGGGA TGGGCTAAAG CACCTCATAG GTCCCATCAT AACTCTTTCG
TGGCTCTGGT GGGCGTATCT TCTGAGAATC ACCAGGTCGA GCATGCTGGA AGTCCTGAAC
AAAGAATACG TGAGAACCGC CAGGGCAAAG GGTCTTCCCG AAGATGTGGT TATAAACAAA
CACGCCAGAA GAAACGCCTT GATTCCTGTT ACCACGGTTG CCGGTGGTAT GGTCATCGGT
CTCTTCTCCG GTACCGTGAT CGTGGAAACG GTCTTCAACA GAACGGGTGT GGGAAGTTTC
ACCGCGCAGG CAGCTCTGCA GCTCGATTAC GCTTCGGTGA TGGCTTCTGC GTTGTTTTTC
TCAACAATTC TTGTTGTTGG AAATCTCATA ATAGATATTC TGTACGCCCT TATAGACCCC
AGAATAAGAC TTGGATGA
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| Protein sequence | MTAYIIRRLL LLPLILLGVT FIVFSMIQSL GPDKLLAAYV NPNMLDKLTT EQMDALKEKY
GLNDFFVVRY VKWLSNTLRG DLGWSLVGKE PVKDALLRRL PYTVELALYA IFPVVFVGIW
LGVKAAVHRG KFLDHFIRIF AVVGWSFPDF VFGLLVLMIF YSILNWLPPG NLSMWAEEVI
KSPEFHRYTK LVTIDALLNG RLDIFWDGLK HLIGPIITLS WLWWAYLLRI TRSSMLEVLN
KEYVRTARAK GLPEDVVINK HARRNALIPV TTVAGGMVIG LFSGTVIVET VFNRTGVGSF
TAQAALQLDY ASVMASALFF STILVVGNLI IDILYALIDP RIRLG
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