| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1141 |
|---|
| Symbol | |
|---|
| ID | 4601396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 1079236 |
|---|
| End bp | 1079787 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639773917 |
|---|
| Product | flavin reductase domain-containing protein |
|---|
| Protein accession | YP_920542 |
|---|
| Protein GI | 119720047 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.494396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGGCG TTGGGTACGT CGAGGTAGAG CTTAGGAGGC ACACTAGGCT ACTCCACCCC
AAGCTCGTCG CGCTCATAGT CTCCGTCGAC GCCTCGGGTA GGCCGAACTT CATGCCGGCC
GCGTGGCTCA CACCTGTATC TGTGAAGCCC CCGCTCGTAG CGGTAGCGGT GGCGCCGGAG
AGGTACACCT ACAGCTTGGT GAAGTCCAGC GGGGTGTTCA CGGTGAACCC TGTCGACGCG
GGCATGCTCA GGGTAGTCGA GGAGGCCGGG TCCGTCTCCG GGAGGGATGT CGACAAGGCT
TCCTCGCTGG GCGTAAGGTT CCTGCCAGCC CTCAGGGTGG GGGCGCCGTG CATCGAGGGT
GCGCTCGCCT GCCTGGAGTG CAGGCTCTGG GCCGAGTACC CCGCCGGCGA CCATTCCATT
CTAGTCGGCG AGGTGCAGGC CGCTAGGGCT AGGCGGGACG CCTGGAGCGG GGCCGTCTAC
GACCTAGCGA AGGCGCGCCT GTTGCTACAC CTAGGGGGAG ACGAGTACGC GACTGCATCG
AGGCTAGGCT AG
|
|---|
| Protein sequence | MQGVGYVEVE LRRHTRLLHP KLVALIVSVD ASGRPNFMPA AWLTPVSVKP PLVAVAVAPE
RYTYSLVKSS GVFTVNPVDA GMLRVVEEAG SVSGRDVDKA SSLGVRFLPA LRVGAPCIEG
ALACLECRLW AEYPAGDHSI LVGEVQAARA RRDAWSGAVY DLAKARLLLH LGGDEYATAS
RLG
|
|---|
| |