| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0059 |
|---|
| Symbol | |
|---|
| ID | 6164909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 43028 |
|---|
| End bp | 43876 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641667224 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001793463 |
|---|
| Protein GI | 171184544 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1355] Predicted dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0213251 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGAG GCGTTAGGAA GCCCGCCGTC GCCGGCTATT TCTACGAGGC CGACCGGGAG
AGGCTTATAC AGCAGATAGA GTGGTCTATA AAACACGAGC TGGGGCCGAA GGCGCCCCAG
TTGCCTAAGC TCGGCGCCGA GGCCCTCGGC GGCGTTGCGC CACACGCGGG ATACATGTAC
TCGGGCCCAG TCGCCGCCTG GATATACGCC GCCCTGTCGG GCTTCGGGAA GCCCGACGCC
TTCGTCATAG TGGGGCCGAA CCACTACGGC ATCGGCGCGC CCGTGGCCAT AATGAAGTCC
GGCGCCTGGG AGACGCCCCT CGGGAGGGTG GAGATAGACG CGGAGCTGGC CGAGGAGATA
GCTAGAAGCG GGGCGGCGGA GGAGGACCCC CACGCCTTCT CTAGAGAGCA CTCGATAGAG
GTGCAGATAC CGTTTATACA GTACTTCTTC GGCGACGTGA AAATAGTGCC AATCGCCCTC
TGGAGGCAGA CCCCCTCGGC GTCGCGGGAG CTGGGCAAGG CGATCGCCGC CGCGTTGAAG
AAACGAGGGG GGAGGATATA CGTGATAGCC AGTAGCGACT TCAACCACTA CGAGCCCCAC
GACGTCACGG TCAAAAAAGA CGAAATGGCC ATAGGAAAGA TCCTGAAGCT TGACGAGGCC
GGCCTCTTCG AGGTAGCCTC CAAGTTCGAC ATATCCATAT GCGGCCTGGG ACCCATAGGC
GTGCTCATAA CGGCCGCGAA AGAACTAGGG TACAACAACG CTACGCTCCT AAAACACGCC
ACCTCTGGAG ACACAAGCGG CTACAGAGAC GAGACGGTGG GCTACGCTAG CATCCTCATT
CACCGGTAA
|
|---|
| Protein sequence | MARGVRKPAV AGYFYEADRE RLIQQIEWSI KHELGPKAPQ LPKLGAEALG GVAPHAGYMY
SGPVAAWIYA ALSGFGKPDA FVIVGPNHYG IGAPVAIMKS GAWETPLGRV EIDAELAEEI
ARSGAAEEDP HAFSREHSIE VQIPFIQYFF GDVKIVPIAL WRQTPSASRE LGKAIAAALK
KRGGRIYVIA SSDFNHYEPH DVTVKKDEMA IGKILKLDEA GLFEVASKFD ISICGLGPIG
VLITAAKELG YNNATLLKHA TSGDTSGYRD ETVGYASILI HR
|
|---|
| |