| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0023 |
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| Symbol | |
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| ID | 6166266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 15505 |
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| End bp | 16113 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641667188 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001793427 |
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| Protein GI | 171184508 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00826547 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCGGCGA ATCTTCCTCT GGTTGTTGCC CTAGACACAG AAGTGCTAAA GGCCATCGAC
GTGGCGAAGA GGCTGAAAGG CGCCGTGGCT GGGTTCAAGG TGGGCTGGGA TTTGATATTC
GAGGGGGGCA TCTCCATAGT AGGCGAAATT GCGAGATACG GCAACGTGAT CGTCGACCTA
AAGATCGCGG ATGTGCCGCA CGTCGCCAGC AGAGTAGTGG AGAAGCTCGT CAACAGAGGC
GCTTGTTGTG TAATCGTCCA CGGCTTCCTC CACCCCTCCC TCCCCAGGGG ACAACACGTA
TACGTGCTAG TCAAGATGAC CGCGCCTACC ATATACGACG AAATGTGGGA GAAGTTGCTA
AACTCCGTGC AAGACGTCAG AGGCTTCGTC CTCCCCGGCA ACCAGCCCGA GGTGGTCGCC
CAGGCGAGGA AGAGGATAGG GTGTAGCTAT AGGATCATCT CGCCGGGCAT AGGGCCCCAG
GGCGGCAGAC CGGGGGCCGC GATAGAGGCT GGGGCGGACT TCGAGATCGT GGGCAGATAT
GTGCTGGAGG ACCCCGCCCG CATATCGCAG TGGGCCCAGT ACAGACCCAC CTGCTTCGAA
ACGCCCTAG
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| Protein sequence | MAANLPLVVA LDTEVLKAID VAKRLKGAVA GFKVGWDLIF EGGISIVGEI ARYGNVIVDL
KIADVPHVAS RVVEKLVNRG ACCVIVHGFL HPSLPRGQHV YVLVKMTAPT IYDEMWEKLL
NSVQDVRGFV LPGNQPEVVA QARKRIGCSY RIISPGIGPQ GGRPGAAIEA GADFEIVGRY
VLEDPARISQ WAQYRPTCFE TP
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