Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0007 |
Symbol | |
ID | 6164654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 3943 |
End bp | 5070 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641667172 |
Product | PUA domain-containing protein |
Protein accession | YP_001793411 |
Protein GI | 171184492 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATAC ATGGAATAGA GATCGACGAC GAACTCTACA AGCATTTTCT CCAGTTTCTT TCCGACAGCG AGATAGACGC CCTATTTCTC TCAATCACGA GACCGCCAAG GCGGTACTAC ATAAGGGTGA ACACGGCAAA AACCACGAGA GAGGAGCTCA TCGGGCGGTT GAGAGCGCGC GGGGTGACTG CCTACCCAGA CGAGCGCTTT GACGACGCCT TATGGATGCC GGTGGAGGGC CCCTTTAAGA TACCCACCGC GAGGAAAAGG GTAGTGGTGG ACAAGAAAGC CGCAGAAAGC GTTATGATGG GCGCCGACCT CTACGCCCCA GGCGTGGTAA AGACAGACCA CGTGAGACGC GGAGAGGAGG TAAACGTGGT GTCGGACAAC GGCGTTGTGG TAGCCTTCGG AGTCGCCGTT TCGGACAGCG ACGAGGTGAT GAAGACGCGG AGGGGGCTTT ACATAAGGGT TGAGACGTCT CTGTATAAAA CGCCCAAGAT CCGAGATCTC CCAGAGTACA GAGACGGCCT CTTCTACAGC CAGAGCCTGC CCGCCATCGC CGTAGGCCAC GTGGCGAAAA GAGCCGGCGC GGCCACCGCC GTGGATCTCA ACGCGGCTCC CGGCGGCAAG GCAACCCACC TCGCCCAGAT GGACATGCGG GTTGTGGCCT TTGACAGATC GTGGCCGAAG ATCGAGAGGC TGAAGAGAGA AGTCGAGAGG CTGGGCCTAG CCGGCAACAT AGACGTGATA CTGCACGACA GTAGATACGT GGATAGGGAC TTCCCCAGGC TCCGCGCCGA CCTCGCCCTT GTGGATCCCC CCTGTACAGA CATTGGGGTG AGGCCGAAGA TATATCACAG GGTCACCATG GAGATGGCTA AAACGCTATC CCGCTACCAG CTACAGTTCC TCAAAACAGC CCTAAAGATC GCGTCAAACG TGATATACTC GACATGCACC CTGACTTACA TAGAAAACGA AGATGTGGTG AAAAAGTCAG GCGCCGTACC GGCCGACGTT GGGTTAGACG TGGGAGGGCC CGGCTGGGGC TGTCCAGAGT GCAGACGGTT CCTTCCCCAC GTACACGACA CGCCGGGCTT CTTCATAGCG CTCCTCAGCC GCCGGTAG
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Protein sequence | MNIHGIEIDD ELYKHFLQFL SDSEIDALFL SITRPPRRYY IRVNTAKTTR EELIGRLRAR GVTAYPDERF DDALWMPVEG PFKIPTARKR VVVDKKAAES VMMGADLYAP GVVKTDHVRR GEEVNVVSDN GVVVAFGVAV SDSDEVMKTR RGLYIRVETS LYKTPKIRDL PEYRDGLFYS QSLPAIAVGH VAKRAGAATA VDLNAAPGGK ATHLAQMDMR VVAFDRSWPK IERLKREVER LGLAGNIDVI LHDSRYVDRD FPRLRADLAL VDPPCTDIGV RPKIYHRVTM EMAKTLSRYQ LQFLKTALKI ASNVIYSTCT LTYIENEDVV KKSGAVPADV GLDVGGPGWG CPECRRFLPH VHDTPGFFIA LLSRR
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