Gene Tmel_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1588 
Symbol 
ID5296959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1575855 
End bp1576358 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content32% 
IMG OID640769865 
ProductBioY protein 
Protein accessionYP_001306817 
Protein GI150021463 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000111141 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA GAGATATTTC ATTAATTGCA CTTTTTGTCA CATTAACAGT TGTGGGCTCT 
CAAATTAGTA TACCTATTGG CACTGTGCCA ATAACTTTAC AGGTTTTGAT GATATTTTTA
ACAGGATATT TTTTAAAACC CTTTCAAGCT TTATTAACGC AGATAATTTA TTTATTACTT
GGTATCGTTG GTTTACCTGT ATTTGCAGGT TTTTCTGGAG GGATTGTGCA TCTTTTTGGA
CCAACAGGCG GATATTTATT GGCGTTTCCC ATTGCTGCGT TAATTGTTGC ATTTTCCAAA
AAAGATTATT TTTCAATGTT TTTGTATGGT ATTTTTGGGC TTTTGGTGAT ATATTTGTTA
GGGTTTAGTG TCCTAGCATA TCATCTTAAA AGTTTTTCTA AAGCATTCAT GGTTGGAGTT
TTGCCGTTTA TTGGTATAGA TTTTGTAAAG ATGATTTTAG CTGTAATAAT TTCAAAAAGA
GTTTTAAGGG TGGTGGAAGT ATGA
 
Protein sequence
MKVRDISLIA LFVTLTVVGS QISIPIGTVP ITLQVLMIFL TGYFLKPFQA LLTQIIYLLL 
GIVGLPVFAG FSGGIVHLFG PTGGYLLAFP IAALIVAFSK KDYFSMFLYG IFGLLVIYLL
GFSVLAYHLK SFSKAFMVGV LPFIGIDFVK MILAVIISKR VLRVVEV