Gene Tmel_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1021 
Symbol 
ID5296841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1049524 
End bp1050006 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content27% 
IMG OID640769305 
ProductPHA accumulation regulator DNA-binding protein 
Protein accessionYP_001306267 
Protein GI150020913 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGTTAA TAAAAAAATA CAAAAACAGA AAATTGTATG ATACGTTTGA TAAACAATTC 
ATTACATTGG ATGATATTGC TAATTTTGTT AAAAAAGGTG AGATTATTAA AGTTATAGAT
GACCTGGGTA ATGATATTAC CCAGGAAATT TCTTTAAAAG CAAGGTTAAA GGGAAAGATA
TTTGGAAATA TTAGAAGGGA AATTATTGAA AAACTCATAC ATGGTTTTAT TAAAATATTT
AAGGGAAATA CGGATGAATT TGTGGAGATT TTACTTGATT TAGTAAATCA GGGGGTTTTA
CCTGCAGATA TAGCCAAAGA GCTTGGAAAT TCCGTAATAA AACATTTTAA TGAATTTAAT
GATAGAATAA AGGAAGATAT TTTGGAAATT ATAAAATCAA CAGGTTTTGT TCCAAAACAA
GAATATGAAG AGTTAAAAGA AAAGTATGAA AGGTTAAAAA GAAAATGTAA AGAGGGGGAA
TAG
 
Protein sequence
MRLIKKYKNR KLYDTFDKQF ITLDDIANFV KKGEIIKVID DLGNDITQEI SLKARLKGKI 
FGNIRREIIE KLIHGFIKIF KGNTDEFVEI LLDLVNQGVL PADIAKELGN SVIKHFNEFN
DRIKEDILEI IKSTGFVPKQ EYEELKEKYE RLKRKCKEGE