| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3205 |
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| Symbol | |
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| ID | 7315578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3355784 |
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| End bp | 3356752 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643618105 |
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| Product | octaprenyl-diphosphate synthase |
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| Protein accession | YP_002515261 |
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| Protein GI | 220936362 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.192377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTCG ACCAGATACG CGCGCTCGTC GCCGATGACA TGAATGCGGT GAACGACCGC
ATCCGCGAGC GGCTGCAGTC CTCCGTGGTG CTCATCAACC AGCTGGGCCA CTACATCATC
AACAGCGGCG GCAAGCGCCT GCGCCCGCTG CTGGTGCTGC TCTCCGCCCG GGCCTGCGGG
GCCGGCGACC GGCGCCACAT CGACCTGGCG GCCATCATCG AGTTCATTCA CACCGCCACG
TTGCTGCACG ACGACGTGGT GGACGCCTCG GAACTGCGCC GGGGCCGGGA GACTGCCAAC
GCCCTGTTCG GCAACGAGGC CAGCGTGCTG GTGGGGGATT TCCTCTACTC CCGCTCCTTC
GAGATGATGG TGGAGATCGG CTCGATGCGG GTCATGGAGA TCCTCGCCCA CACCACCAAC
ACCATCGCCG AGGGCGAGGT GCTGCAGCTG CTCAACTGCC ACGATGCGGA CACCCCCGAG
GAGCGCTACA TGGAGGTGAT CCAGTCCAAG ACCGCCAAGC TGTTCGAGGC CGCCGCCCGC
ATCGGCGCCG TGCTGGGCGG GCAGCCTGAG TCCGTGGAGC AGGCCATGGC GGCCTATGGC
ATGCACCTGG GCACGGCCTT CCAGCTCATC GACGACGTGC TGGACTACGG CGCCTCCGCC
GAGGAGATGG GCAAGAACAT GGGTGACGAC CTGGCCGAGG GCAAGCCCAC CCTGCCCCTG
ATCCACGCCA TGCGGGTGGG TGACGCCGAC CAGGCCGGGC TGATCCGCGA GGCCATCGAG
CAGGGCGGGC GCGACTATGC CGACCGGGTG CTCGGGATCA TCCAGGCCAC CGGGTCGCTG
GACTACACCC GTGCCGTGGC CGCCGCCGAG GCCGATCGGG CAGCCGCGAG CCTCGCCGTG
CTGCCCGACA CCCCGGAGCG CCAGGCCCTG GAATTCCTGG CCCGGTTCTC GGTGACGCGG
GGTTTTTGA
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| Protein sequence | MDLDQIRALV ADDMNAVNDR IRERLQSSVV LINQLGHYII NSGGKRLRPL LVLLSARACG
AGDRRHIDLA AIIEFIHTAT LLHDDVVDAS ELRRGRETAN ALFGNEASVL VGDFLYSRSF
EMMVEIGSMR VMEILAHTTN TIAEGEVLQL LNCHDADTPE ERYMEVIQSK TAKLFEAAAR
IGAVLGGQPE SVEQAMAAYG MHLGTAFQLI DDVLDYGASA EEMGKNMGDD LAEGKPTLPL
IHAMRVGDAD QAGLIREAIE QGGRDYADRV LGIIQATGSL DYTRAVAAAE ADRAAASLAV
LPDTPERQAL EFLARFSVTR GF
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