| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2229 |
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| Symbol | tolB |
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| ID | 7317477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2357423 |
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| End bp | 2358730 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643617125 |
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| Product | translocation protein TolB |
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| Protein accession | YP_002514296 |
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| Protein GI | 220935397 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCGA TGCCCAAGAT GATCCGAAGC CTGCTTCTCC TGTTCTGCCT GCTGCCCCTC
GGCGCCCAGG CAGCGCTGGA GATTCGAATC ACCCAGGGTG TGGAAGGTGC CATGCCCATC
GCCATCGTGC CCTTCGGCTG GGAGGGCCCG GGCGCCCGCC CGCCGGAGGA CATCGGCGCC
ATCATCCAGG CCAACCTGCA CCGCAGCGGC CAGTTCTCGC CCATGGAGCA GGGTCGCATG
CCCCAGCGGC CCACCCGGGG CCAGGACGTG AACTTCCAGG TCTGGCGCGG GGCCGGGGTG
GATTACGTGG TGATCGGCCG CCTGGTGCCC GCCGGGGCGG ATCGTTTCAA CGTGCAGTTC
CAGCTGTTCG ACACGGTGCG CGGCCGGCAG GTGACCGGCT ACAGCATACC GGCATCGTCC
AGCCAGCTGC GCCGCGCCGC CCACATGGCC AGCGACATCA TTTACCAGCA GATCACCGGG
GTGCGCGGTG CCTTCAACAC CCGGGTGGCC TATGTGAGCG TCACCCGCGA GGGCGGTGAG
CAGCGCTTCG CCCTGCAGGT GGCCGATGCC GACGGCCACA ACCCGCGCAC CATCTTCCGC
TCCCGCCAGC CCATCCTGTC GCCGGTTTGG TCGCCGGACG GCCGGCGCCT GGCCTACGTG
TCCTTCGAGA ACCGCAACTC GGAGATCTAC GTCCAGGACA TCGACGGCGC CCAGCGCGAA
CGCATCGCCA GTTTCCAGGG CATCAACAGC GCCCCGGCCT GGTCGCCGGA CGGCCGGCGC
ATGGCCCTGA CCCTGTCCCG GGACGGCCAG CCCGATATCT ACGTCATGAA CCTTGCCGAC
CGCAGTCTTC TGCGCGTGAC CAACAGCCGC TCCATCGACA CCGAGCCGGA GTGGACGCCC
GACGGCCGCA ACCTGCTGTT CACCTCGGAC CGGGCCGGGA ATCCGCAGAT CTACGAACAG
AGTCTCAGCG GCGGTCAGCC CCGGCGGTTA ACGTTTGACG GCCGTTACAA CGGCAACCCG
ACCCTCTCCC CGGACGGCCG CCTAGTGGCC ATGGTCAACG GTGATGGCGG GCGTTTCCGC
ATCGCGGTGC TGGATCGCCA GACCCGCCAG TTCCGCCTGC TCACCGACGG CCGCCTGGAC
GAGGCACCGA GCTTCGCACC CAACGGCAGC ATGATCATCT ACGCCACCGC AGGCCGGGGC
GGCCAGGGCG AACTGGCCGC GGTCAGCGCC GATGGCCGCG TGCGCCAGAG CCTGGTTCTG
CAGGAGGGCG AGGTGCGCGA GCCGGCCTGG TCACCGTTTC TCGATTGA
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| Protein sequence | MIPMPKMIRS LLLLFCLLPL GAQAALEIRI TQGVEGAMPI AIVPFGWEGP GARPPEDIGA
IIQANLHRSG QFSPMEQGRM PQRPTRGQDV NFQVWRGAGV DYVVIGRLVP AGADRFNVQF
QLFDTVRGRQ VTGYSIPASS SQLRRAAHMA SDIIYQQITG VRGAFNTRVA YVSVTREGGE
QRFALQVADA DGHNPRTIFR SRQPILSPVW SPDGRRLAYV SFENRNSEIY VQDIDGAQRE
RIASFQGINS APAWSPDGRR MALTLSRDGQ PDIYVMNLAD RSLLRVTNSR SIDTEPEWTP
DGRNLLFTSD RAGNPQIYEQ SLSGGQPRRL TFDGRYNGNP TLSPDGRLVA MVNGDGGRFR
IAVLDRQTRQ FRLLTDGRLD EAPSFAPNGS MIIYATAGRG GQGELAAVSA DGRVRQSLVL
QEGEVREPAW SPFLD
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