| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1674 |
|---|
| Symbol | |
|---|
| ID | 7316987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1773676 |
|---|
| End bp | 1775307 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643616566 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002513744 |
|---|
| Protein GI | 220934845 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCA TAAGACTCAC AATCAGAATG CGACTTTATC TCATGATCAC CCTGGCGCTG
CTGTTCATGG TCATCGTTGG CGTCATGGGG CTGCGCGGCA TGTCCCAGGC CGATGAAGGC
CTGCGCACCG TCTACGAGGA CCGGCTTGTT CCCACGGGTC AGATCTCGGG GATCATTGAA
AGTCTCATGG ACAACCGCAT TCAGCTCGTC ACCGTGCTTC GCGACCCCAC TCCCGCGAAC
ATCCAGGCAC GTACGCGAAC CATCGAAGAA AACATTGCAG ACATAGATCG CACCTGGAAT
GCCTTCATGG AAACCTACCT CACGCCCCGT GAACGGGAGC TCGCCGATGC ATTCATTCGA
GAGGAGCAGG CCTTCGTCTA CCAGGGCCTC ACTCCCGCCA TCCAGGCCCT GCGCAATGGC
AATCTGACAG AGGCGTCTCG TTTGCTGGAA ACCGAGGTCG AACCCCGCTA TCGCAACTTC
AGAGCAGTGG CCCAGGACCT GCTGAACCTG CAGCTGGAGG TCGCCGACCA GGTCTACAAG
GATGCCGTTG CCCATTACAT CTGGACCCGC AACCTGACCA TCGCGCTCCT GATCGCTGCG
GTGCTGGTTT CACTGTTTGT CTCGTATTTC GTGGTCCGAC GCATTACCGG CGTTGTCACG
GACCTGGAGG CGGCCAGCGC AAGCATGGCC AATGGTGATC TGACTGTCAC CGTGCTGGAA
ATCGGCGACG ACGAGTTGAC CCGCGTCACT CGGTCTTTCA ACCACATGGC AAGAGGTTTT
CGCGATATCA TCGGCCAGGT CACCGGGGCT GCGACTCAGC TCGCAGCGGC CTCCGAGGAA
CTTTCCGCGG TCACGACCCA GACGACCCAG GGCGTGAAGG AACAGCAGAG CCAGACCGAC
CAGGTCGCCA CGGCCATGAA CGAAATGACC ACCTCCGTGC ACGAAGTCGC GCGCAGCGCC
TCCGAGGCCT CCCAATCCGC CGCACGGGCG AACGAGGAAT CCACGGAAGG CAAGCAGGTG
GTGGCCAAGG CCATCGACTC CATCGAGGGT CTGAGCAATG AGGTGAACAA GGCCGCCGAG
GTCATCCGGC AACTGGAGGA CGACAGTGAA AAGATCGGTG CCGTGCTGGA TGTGATCCAG
GGGATCGCCG AGCAGACCAA CCTACTGGCG CTCAACGCCG CCATCGAGGC CGCCCGGGCC
GGAGAACAGG GCCGTGGATT CGCCGTGGTC GCGGACGAGG TACGCACCCT CGCCAGCCGG
ACGCAGCAGT CCACTCAGGA GATCGAGCAG ATGATCGAAC GCCTGCAGAA AGGTGCCAGG
ACAGCGGTAA CCGTGATGCA GGAGGGCAGC AAGCAGGCCA ATGAAACCAC CGGGCTTGCA
GCCGACGCCG CGGAATCCCT CGAGGTGATC ATCCGTGCCG TCGGATCCAT CAACGACATG
AATGCCCAGA TCGCGAGCGC TGCCGAAGAA CAGGGCGCCG TGGTTGAGGA AATCAACCGT
AACGTGGTCA AGATCAACGA GGGTGTTCAG GACGTGGCCG CAGGTTCCGA TCAGACCGCG
ACCGCCACGG AGGAACTGGC CCGCCTGGCC TCCGAACTGC GGGAGACCGT GCAACGTTTT
CGCATTGCCT GA
|
|---|
| Protein sequence | MKGIRLTIRM RLYLMITLAL LFMVIVGVMG LRGMSQADEG LRTVYEDRLV PTGQISGIIE
SLMDNRIQLV TVLRDPTPAN IQARTRTIEE NIADIDRTWN AFMETYLTPR ERELADAFIR
EEQAFVYQGL TPAIQALRNG NLTEASRLLE TEVEPRYRNF RAVAQDLLNL QLEVADQVYK
DAVAHYIWTR NLTIALLIAA VLVSLFVSYF VVRRITGVVT DLEAASASMA NGDLTVTVLE
IGDDELTRVT RSFNHMARGF RDIIGQVTGA ATQLAAASEE LSAVTTQTTQ GVKEQQSQTD
QVATAMNEMT TSVHEVARSA SEASQSAARA NEESTEGKQV VAKAIDSIEG LSNEVNKAAE
VIRQLEDDSE KIGAVLDVIQ GIAEQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRTLASR
TQQSTQEIEQ MIERLQKGAR TAVTVMQEGS KQANETTGLA ADAAESLEVI IRAVGSINDM
NAQIASAAEE QGAVVEEINR NVVKINEGVQ DVAAGSDQTA TATEELARLA SELRETVQRF
RIA
|
|---|
| |