Gene Tgr7_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1516 
Symbol 
ID7318003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1627796 
End bp1628317 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content61% 
IMG OID643616407 
Productpolyhydroxyalkonate synthesis repressor, PhaR 
Protein accessionYP_002513587 
Protein GI220934688 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.064215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAGAT ATTTACCGGA CACGACACAT GGAGAGGACC GGGTGAAACC GCCGCGCATC 
ATCAAGAAGT ATCCCAATCG TCGGCTCTAC GACACCGAGG AAAGCCGCTA CGTGACCCTG
GCGGACGTTC AGCAGCTGGT GCGCGGCGGC ACGGACATCC AGGTGCTGGA CAGCCAGAGT
GGCGAGGATA TCACCCGCAG CATCCTGATC CAGATCATCA CCGACCAGGA GACCGGCAAG
GATCCGCTGT TCTCCACCGA GATGCTCACC CGCTTCATCC GCTTCTACGA CGACGCGGTC
CACGACGCCT TTTCCGGCTA CCTGGAACAG AGCATGAAGT TCTTCGCCGA TCAGCAGCAG
CACTTCAGCC GCCAGATGCA GGAGGCCATG AGCGGCAAGG GCGCCTGGGA CGTGGCGGAG
ATGACCCGCC GCAACCTGCA GTTCTGGCAG GACATGCAGG GGGAATTCCT CAAGGCTGCG
GGACTGGGGG GGACACCGAA GGACAAGTCC GGAGGCAAGT GA
 
Protein sequence
MVRYLPDTTH GEDRVKPPRI IKKYPNRRLY DTEESRYVTL ADVQQLVRGG TDIQVLDSQS 
GEDITRSILI QIITDQETGK DPLFSTEMLT RFIRFYDDAV HDAFSGYLEQ SMKFFADQQQ
HFSRQMQEAM SGKGAWDVAE MTRRNLQFWQ DMQGEFLKAA GLGGTPKDKS GGK