Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1516 |
Symbol | |
ID | 7318003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1627796 |
End bp | 1628317 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643616407 |
Product | polyhydroxyalkonate synthesis repressor, PhaR |
Protein accession | YP_002513587 |
Protein GI | 220934688 |
COG category | [S] Function unknown |
COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.064215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAGAT ATTTACCGGA CACGACACAT GGAGAGGACC GGGTGAAACC GCCGCGCATC ATCAAGAAGT ATCCCAATCG TCGGCTCTAC GACACCGAGG AAAGCCGCTA CGTGACCCTG GCGGACGTTC AGCAGCTGGT GCGCGGCGGC ACGGACATCC AGGTGCTGGA CAGCCAGAGT GGCGAGGATA TCACCCGCAG CATCCTGATC CAGATCATCA CCGACCAGGA GACCGGCAAG GATCCGCTGT TCTCCACCGA GATGCTCACC CGCTTCATCC GCTTCTACGA CGACGCGGTC CACGACGCCT TTTCCGGCTA CCTGGAACAG AGCATGAAGT TCTTCGCCGA TCAGCAGCAG CACTTCAGCC GCCAGATGCA GGAGGCCATG AGCGGCAAGG GCGCCTGGGA CGTGGCGGAG ATGACCCGCC GCAACCTGCA GTTCTGGCAG GACATGCAGG GGGAATTCCT CAAGGCTGCG GGACTGGGGG GGACACCGAA GGACAAGTCC GGAGGCAAGT GA
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Protein sequence | MVRYLPDTTH GEDRVKPPRI IKKYPNRRLY DTEESRYVTL ADVQQLVRGG TDIQVLDSQS GEDITRSILI QIITDQETGK DPLFSTEMLT RFIRFYDDAV HDAFSGYLEQ SMKFFADQQQ HFSRQMQEAM SGKGAWDVAE MTRRNLQFWQ DMQGEFLKAA GLGGTPKDKS GGK
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