Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0101 |
Symbol | |
ID | 7316107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 110987 |
End bp | 112291 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643614990 |
Product | major facilitator transporter |
Protein accession | YP_002512191 |
Protein GI | 220933292 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.467477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTACA CCTACCCGCC CCGCTTCCAG CAGACGCGCT GGACCATCTA CTCCCTGCTC ATCCTGGCCT ACATGCTGGT GTTCTTTCAC CGCATGGCGC CGGGGGTGGT GGCCGGGGAC CTGTCCGCCG CCTTCGGCAT CAGCGCCGCC GCGCTGGGTT CCCTGGCGGC CATGTATTAC TACATCTACA CCGCCATGCA GATCCCCGCC GGCGTGCTGG CGGACACCCT GGGGGCCCGC TACGCGGTGA TGCTGGGCAA CCTGGTCGCC GGGGTGGGCT CCATCACCTT CGGCCTGGCG GAGACCTTCG CGGTGGCGAG CACGGGCCGC TTCCTGGTGG GGCTCGGGGT CTCGGTGGTG TTCGTGGGGC TCATGAAGAG CAACAGCGTG TGGTTCAGCG AGCGCAACTA CGGCACCATC AGCGGCGTCA CCCTGCTGCT CGGCAACCTG GGCGCCATCG CCGCCACCGG CCCCCTGGCC CTGGTGCTGG TGCACTACGA ATGGCGCAGC GTGTTCGTGG CCCTGGGCGT GGTGGCGATC GGGCTGGCCC TGGCCTCCTG GTGGAAGGTG CGCAACCGCC CCGAGGACCT GGGTTTCCCC TCGGTGCGCG AGATGGAGGG CCTGCCCGCC CACGCGCCGC GCCAGCAGCA CTGGCTTGCC GACCTGCGCG GCGTGCTCGC CCACCGGCGC CTCTGGCCCG GCTTCGTCTA CGACTTCGGG GTGACCGGCT CCCTGTTCGG CTTCGTGGGC CTGTGGGCTA TCCCCCTGCT GCGGGACGTG CACGGCCTGA GCCGGGGTGA TGCCTCCGGC TACACCACCG CCGCCATGGT CGCCTTCGCC CTGGGTTGCC TGGTGGCGGG CAGCTTCTCC GACCGCCTGG GCCGTCGCCG CCCGGTGCTC ACCGGCGGGG CGCTGGCCTA TGCATCCGTC TGCGCCGCCT TCCTGTTCCT GCCCTGGGGC CCGGGCGCCT CCGGCTACCT GCTGTTCACC GCCCTGGGCC TGTCCGCCGG CTGTTTCGTG GTGGCCTATG CCCAGGCCAA GGAGGTCACC GCCCCCGCCC TCTCCGGCAT GGCCATCGCC CTGGTGAACA CCGGCCTGTT CCTGGGCGCG GCCCTGTTCC AGCCCCTGTT CGGCTGGGTG CTGGACCTGG GCTGGGACGG GCAGACGGTC GCCGGCGTGC CGGTCTACGG CCTGGCCGAC TACCGCCAAG GCCTCCTCCT GCTGCTCGGC TTCGCCGGCC TGGCGGTGCT CGCCAGCCTG TTCTTTACCG AAACCCGCAG CCGGAACATC ACAGTGAACG GCTGA
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Protein sequence | MSYTYPPRFQ QTRWTIYSLL ILAYMLVFFH RMAPGVVAGD LSAAFGISAA ALGSLAAMYY YIYTAMQIPA GVLADTLGAR YAVMLGNLVA GVGSITFGLA ETFAVASTGR FLVGLGVSVV FVGLMKSNSV WFSERNYGTI SGVTLLLGNL GAIAATGPLA LVLVHYEWRS VFVALGVVAI GLALASWWKV RNRPEDLGFP SVREMEGLPA HAPRQQHWLA DLRGVLAHRR LWPGFVYDFG VTGSLFGFVG LWAIPLLRDV HGLSRGDASG YTTAAMVAFA LGCLVAGSFS DRLGRRRPVL TGGALAYASV CAAFLFLPWG PGASGYLLFT ALGLSAGCFV VAYAQAKEVT APALSGMAIA LVNTGLFLGA ALFQPLFGWV LDLGWDGQTV AGVPVYGLAD YRQGLLLLLG FAGLAVLASL FFTETRSRNI TVNG
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