Gene Tfu_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1953 
Symbol 
ID3580178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2284461 
End bp2285609 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content70% 
IMG OID637685645 
Productbifunctional RNase H/acid phosphatase 
Protein accessionYP_290009 
Protein GI72162352 
COG category[G] Carbohydrate transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI
[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGCAG GGATGGGACG CAGGATCGTC ATCGAAGCGG ACGGCGCGTC CCGGGGCAAC 
CCCGGCCCAG CCGGGTACGG GGCCCGGGTG CGCGACGCCG ACACGGGGGA ACTCCTCGCG
GAAGTCGCCT CCCCGATCGG GGAGGCCACC AACAATGTGG CCGAATACCG GGGCCTGATC
GCGGGCCTGG AAGCAGCGGC CGCGATTGAC CCGACCGCCG CAGTGGAGGT CCGCATGGAC
TCCAAGCTCG TGGTGGAACA GATGTCGGGC CGCTGGAAGA TCAAACATCC GGCGCTGCAG
CCGCTGGCCC GCCAGGCCCG GCAGGTCGCA GCGTCACTGG CGTCGGTGAC GTACCGGTGG
GTGCCGCGGG AGCAGAACGC GCAGGCCGAC CGGCTCGCCA ACGAAGCGCT CGACGGCGCT
GTGCGCAACT GGAGCACCCA GCGAACAGAA CCGGTGCAGG CAGCCGAACC GGTCGAACCG
CCGGTGGACC AGGGGAAGAC CGACGGCACC GCGCTGGGCT GGGGACCAGC GGACACCAAC
CCCACCCGGC TCCTGCTGCT GCGCCACGGC CAGACACCCA TGTCCGTGGA GCGGCGTTTC
GCCGGGATCG GCGACATCCC CCTCACCGAA GTCGGCCACG AGCAGGCTAA AGCCGCGGCA
CGGCGGCTCG CGCAACGCCC CGTCGACGTG GTCGTCTCCT CCCCGCTGCG CCGCACCCTG
GACACCGCCC AGTACGTGGC CAAGGAATGC GGACTGGACG TGGAAGTGGA GGAGGACTTC
CGGGAAGCCG ACTTCGGCGC CTGGGAGGGG ATGACGTTCG CTGAAGCGCG CAAGCACTCC
CCGCAGGAGT TCCACCGCTG GCTCTCCGAT CCGCACGTCC CCCCTCCGGG AGGGGAGAGT
TTTGCCGAAG TCTCCCGCCG GGTCACCCGG GCCCGGGACC GGGTGCTCGC CCGGCACCGC
GGCCGCACCG TGGTGGTGGT CACCCACGTC ACCCCGATCA AACTGCTGGT CCAGCAGGCC
ATGCTCGCCC CGCTGCCGGC GCTGTACCGG ATGCATCTGG ATGTGGCGTG CCTCTGCGAG
GTCCACTGCT TCAGCGATGG CCCGATGGTG GTGCGTTCCC TGAACGACAC CGGCCACCTG
GCCTGCTAG
 
Protein sequence
MRAGMGRRIV IEADGASRGN PGPAGYGARV RDADTGELLA EVASPIGEAT NNVAEYRGLI 
AGLEAAAAID PTAAVEVRMD SKLVVEQMSG RWKIKHPALQ PLARQARQVA ASLASVTYRW
VPREQNAQAD RLANEALDGA VRNWSTQRTE PVQAAEPVEP PVDQGKTDGT ALGWGPADTN
PTRLLLLRHG QTPMSVERRF AGIGDIPLTE VGHEQAKAAA RRLAQRPVDV VVSSPLRRTL
DTAQYVAKEC GLDVEVEEDF READFGAWEG MTFAEARKHS PQEFHRWLSD PHVPPPGGES
FAEVSRRVTR ARDRVLARHR GRTVVVVTHV TPIKLLVQQA MLAPLPALYR MHLDVACLCE
VHCFSDGPMV VRSLNDTGHL AC