Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1953 |
Symbol | |
ID | 3580178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2284461 |
End bp | 2285609 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637685645 |
Product | bifunctional RNase H/acid phosphatase |
Protein accession | YP_290009 |
Protein GI | 72162352 |
COG category | [G] Carbohydrate transport and metabolism [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGCAG GGATGGGACG CAGGATCGTC ATCGAAGCGG ACGGCGCGTC CCGGGGCAAC CCCGGCCCAG CCGGGTACGG GGCCCGGGTG CGCGACGCCG ACACGGGGGA ACTCCTCGCG GAAGTCGCCT CCCCGATCGG GGAGGCCACC AACAATGTGG CCGAATACCG GGGCCTGATC GCGGGCCTGG AAGCAGCGGC CGCGATTGAC CCGACCGCCG CAGTGGAGGT CCGCATGGAC TCCAAGCTCG TGGTGGAACA GATGTCGGGC CGCTGGAAGA TCAAACATCC GGCGCTGCAG CCGCTGGCCC GCCAGGCCCG GCAGGTCGCA GCGTCACTGG CGTCGGTGAC GTACCGGTGG GTGCCGCGGG AGCAGAACGC GCAGGCCGAC CGGCTCGCCA ACGAAGCGCT CGACGGCGCT GTGCGCAACT GGAGCACCCA GCGAACAGAA CCGGTGCAGG CAGCCGAACC GGTCGAACCG CCGGTGGACC AGGGGAAGAC CGACGGCACC GCGCTGGGCT GGGGACCAGC GGACACCAAC CCCACCCGGC TCCTGCTGCT GCGCCACGGC CAGACACCCA TGTCCGTGGA GCGGCGTTTC GCCGGGATCG GCGACATCCC CCTCACCGAA GTCGGCCACG AGCAGGCTAA AGCCGCGGCA CGGCGGCTCG CGCAACGCCC CGTCGACGTG GTCGTCTCCT CCCCGCTGCG CCGCACCCTG GACACCGCCC AGTACGTGGC CAAGGAATGC GGACTGGACG TGGAAGTGGA GGAGGACTTC CGGGAAGCCG ACTTCGGCGC CTGGGAGGGG ATGACGTTCG CTGAAGCGCG CAAGCACTCC CCGCAGGAGT TCCACCGCTG GCTCTCCGAT CCGCACGTCC CCCCTCCGGG AGGGGAGAGT TTTGCCGAAG TCTCCCGCCG GGTCACCCGG GCCCGGGACC GGGTGCTCGC CCGGCACCGC GGCCGCACCG TGGTGGTGGT CACCCACGTC ACCCCGATCA AACTGCTGGT CCAGCAGGCC ATGCTCGCCC CGCTGCCGGC GCTGTACCGG ATGCATCTGG ATGTGGCGTG CCTCTGCGAG GTCCACTGCT TCAGCGATGG CCCGATGGTG GTGCGTTCCC TGAACGACAC CGGCCACCTG GCCTGCTAG
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Protein sequence | MRAGMGRRIV IEADGASRGN PGPAGYGARV RDADTGELLA EVASPIGEAT NNVAEYRGLI AGLEAAAAID PTAAVEVRMD SKLVVEQMSG RWKIKHPALQ PLARQARQVA ASLASVTYRW VPREQNAQAD RLANEALDGA VRNWSTQRTE PVQAAEPVEP PVDQGKTDGT ALGWGPADTN PTRLLLLRHG QTPMSVERRF AGIGDIPLTE VGHEQAKAAA RRLAQRPVDV VVSSPLRRTL DTAQYVAKEC GLDVEVEEDF READFGAWEG MTFAEARKHS PQEFHRWLSD PHVPPPGGES FAEVSRRVTR ARDRVLARHR GRTVVVVTHV TPIKLLVQQA MLAPLPALYR MHLDVACLCE VHCFSDGPMV VRSLNDTGHL AC
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