Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3497 |
Symbol | |
ID | 4244497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5391012 |
End bp | 5394998 |
Gene Length | 3987 bp |
Protein Length | 1328 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638108471 |
Product | peptidase-like |
Protein accession | YP_723060 |
Protein GI | 113476999 |
COG category | [N] Cell motility [S] Function unknown [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF [COG4995] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACCA GAATCTTCAG CATCACTTAT TTGGCCCAAA CTTGCCTGGC AGCTATTGTT ATTATCAATG GCCTAGAAGC TTTGGTTGTG CAGCCTGTAT GGGCACAGAC TTATGTCTTT CCACAAGAAC CATCAACAAC CGAAGCAACT GAGGAGCTGA TAATTAATGG GACTCTCAAT GAAAATAGTG AGCTGTTGGA AGATGGGAGT TACTTTCAGT GGCACACTTT TACGGGCAAG GCGGGTGAAG CTATTACTAT TGAGTTGAGT AGTTCTGAGT TTGATGCTTA CTTAATGTTA GTAGACCCAA GATCCAATAA AATTGCTGAG AATAATGATG GAGGGGAAAA TAATAATGCC AAAATTACAA TAACTCTACC TACAACAGGA ACTTATACAG TTATTGTCAA TACCTATGAA AAAGGTCAAC AAGGAAGTTA CAAACTGAGT TGGCGACAGG CTTCAGCTAA AGACCAGTCC CTAGCTTCTG CCACAGAACT TAATGACAAA GCTATTGAAC TATATAAACA AGGTAAATAT GATGAAGCAG TTCCTTTATT AGAGCAGTCT TTGAAAATTA GGCAGCAGGC GCTGGGGGCT GAACATCCTG ATGTTGCCGC CAGCCTCAAC AATTTGGCTT TTCTTTACAA TGCTCAAGGA AGGTATACAG AAGCGGAACC TTTGTATATA CAAGCATTAG AGATGAGAAA GAAGCTCCTG GGTGCTGAAC ATCCTGATGT TGCCTCCAGC CTCAACAATT TGGCTTTTCT TTACAAAGCT CAAGGAAGGT ATACAGAAGC GGAACCTTTG TATATACAAG CATTAGAGAT GAGAAAGAAG CTCCTTGGTG CTGAACATCC TGATGTTGCC ACCAGCCTCA ACAATTTGGC TTCTCTTTAC GAATCTCAAG GAAGGTATAC AGAAGCGGAA CCATTGTATA TACAAGCATT AGAGATATTT AAGAAGCTCC TGGGTGCTGA ACATCCTGAT GTTGCCACCA GCCTCAACAA TTTGGCTTTT CTTTACAATG CTCAAGGAAG GTATACAGAA GCGGAACCTT TGTATATACA AGCATTAGAT ATGACAAAGA AGCTCCTGGG TGCTGAACAT CCATCAGTTG CCACCAGCCT CAACAATTTG GCTTTACTTT ACGAGGATCA AGGAAGGTAT ACAGAAGCGG AACCTTTGTA TATACAAGCA TTAGAGATGA GAAAGAAGCT CCTGGGTGCT GAACATCCTG ATGTTGCCAC CAGCCTCAAC AATTTGGCAG GACTTTACAA TGCTCAAGGA AGGTATACAG AAGCGGAACC TTTGTATATA CAAGCATTAG AGATGAGAAA GAAGCTCCTT GGTGCTGAAC ATCCTGATGT TGCCACCAGC CTCAACAATT TGGCTTCTCT TTACGAATCT CAAGGAAGGT ATACAGAAGC GGAACCATTG TATATACAAG CATTAGAGAT ATTTAAGAAG CTCCTGGGTG CTGAACATCC TGATGTTGCC TCCAGCCTCA ACAATTTGGC AGGACTTTAC AAGGATCAAG GAAGGTATAC AGAAGCGGAA CCTTTGTATA TACAAGCATT AGAGATGAGA AAGAAGCTCC TGGGTGCTGA ACATCCTGAT GTTGCCTCCA GCCTCAACAA TTTGGCAGCA CTTTACAAGG ATCAAGGAAG GTATACAGAA GCGGAACCTT TGTATATACA AGCATTAGAG ATGAGAAAGA AGCTCCTGGG TGCTGAACAT CCTGATGTTG CCTCCAGCCT CAACAATTTG GCAGGACTTT ACAATGCTCA AGGAAGGTAT ACAGAAGCGG AACCTTTGTA TATACAAGCA TTAGAGATGA GAAAGAAGCT CCTGGGTGCT GAACATCCAT TAGTTGCCTC CAGCCTCAAC AATTTGGCAG GACTTTACAA TGCTCAAGGA AGGTATACAG AAGCGGAACC TTTGTATATA CAAGCATTAG AGATATTTAA GAAGCTCCTG GGTGCTGAAC ATCCATTAGT TGCCACCAGC CTCAACAATT TGGCAGGACT TTACAATGCT CAAGGAAGGT ATACAGAAGC GGAACCATTG TATATACAAG CATTAGAGAT GAGAAAGAAG CTCCTGGGTG CTGAACATCC TTATGTTGCC ACCAGCCTCA ACAATTTGGC TTTACTTTAC TATGCTCAAG GAAGGTATAC AGAAGCGGAA CCATTGTATA TACAAGCATT AGAGATGAGA AAGAAGCTCC TGGGTGCTGA ACATCCTGAT GTTGCCTCCA GCCTCAACAA TTTGGCAACA CTTTACAATG TTCAAGGTGA CATTGCTTCA GCAGTGCAAT ACCTTAAACG CGGCTTAGAA GTGCAAGAAA AAAACCTAAC TTACAACTTA GCCGCCGGGG CTGAACCTCA AAAAAACAAA TATCTCCAAA CCATCTCAGG AGCAAAGGCT AGAGCCATCT CTCTCCATCT GCAAACAGCA CCAAATGACC CAGCCGCGAC CACTCTAGCA TTAACCACCA TCCTACGCCG CAAAGGTCGC CTCCTCGAAT TCTTCACCAC CAGCAGACAA ATACTCCGAC AACAACTCGA CACTCAAGGA CTACAATGGC TAGACGAACT TAATAATATT TATAGTGAAC TTTCCACTCT GCTCTATAAC GGACCAAAAG ATCTTCCTCT AGAAACCTAC AAGGAAAATT TTGCCCTCTT AGAACAACAG GCAAAAGAAC TAGAAGACAA AATTAGTCGC CGCAGTAGCC AGTTTCGGGC AGCCACCCAA CCTGTAACCT TAGAAGCTAT TCAGGAGTTG ATACCCGCCA ACGCTGCCTT AGTAGAATTT GTCCAGTATT CTCCTTTTGA CCCCAAGACA GGCAAATTCG GTAAACCACG CTATGGGGTT TACGTTCTAA GTAGAGAGGG AGAACCCCAA GGCATGGACC TGGGAACAGT TGAAGAATTT AAAAACATCA TAAAAGTGTT TAGAACTTCT CTACGAGACA AAAGCCAAAC TCCCCTAAAA CAGCTTAAAG ACACAGCCAG AGAACTTGAC CAAAAACTGA TGCAACCTGT ACGTCAACTA CTGGGGTCAC AAAAACAAAT TCTGATTTCT CCTGATAGCA ATCTCAATTT AATTCCTTTT GAAGCATTAG TTGATGAGAA TAACCGCTTT CTCGTAGAAA ACTATAGCTT CACCTACCTA AGCTCAGGAC GGGACTTACT CACATTTACC TCCACACCAA GAAACACCTC ACCAGCGGTA TTGCTAGGAT ACCCTACATA CTCGGAAAAA GATCAGGTAA CTATTAAGTC TAAGGGTAGG TTCGGTGTCT CCGACTTAGG TCTTTCTGGA CTACCAGGAA CCGAAGAGGA GGTCAAAGCC ATTGGTGAGT TGCTTGGAGT TGAACCTTTA CTACGAGAGG CAGCCACTGA AGAAGCCGTA AAACAAGTTC AAAGTCCTTT CATATTGCAT ATTGCTACTC ATGGTTTATT TGAAACAATT GAAGATCCTG AGAAATATCC CACGATAAAT AAAAATTCCC TACTACGGGC AAGTTTAGCT CTGGCTGGGG TTAAAGAGGA ACAAATAGAT GGAGATAATG GTTTATTGAC CGCTTTGGAA GCCGCCGGGC TGAATTTGCT AGGCACAGAG CTAGTGGTAT TATCCGCCTG TGACACAGGG CTGGGGGGAA TAAGTCCCGG AGAGGGGGTT TATGGACTTA GACGAGCATT CGCGATCGCA GGTTCCCAGA GTCAGGTAAT TAGTTTATGG AAAGTTGATG ACCAAGGGAC GAAAGACTTA ATGGTGAAGT ATTATCAACG GTTGTTGGGA GGAGACATGG GACGAACAGA AGCTTTAAGG CAGACTCAAC TGGAGATGCT GGGGGGGGAA GCCGGGGAAA AGTACAGTCA TCCTTATTTT TGGGCGAGTT TTATTCCCTC TGGAAATTGG CTGGCGATCC CTCCCAGGGT AGAAAGTAAA AAATCAAAAG TCAACAGTCA AAGGTAA
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Protein sequence | MFTRIFSITY LAQTCLAAIV IINGLEALVV QPVWAQTYVF PQEPSTTEAT EELIINGTLN ENSELLEDGS YFQWHTFTGK AGEAITIELS SSEFDAYLML VDPRSNKIAE NNDGGENNNA KITITLPTTG TYTVIVNTYE KGQQGSYKLS WRQASAKDQS LASATELNDK AIELYKQGKY DEAVPLLEQS LKIRQQALGA EHPDVAASLN NLAFLYNAQG RYTEAEPLYI QALEMRKKLL GAEHPDVASS LNNLAFLYKA QGRYTEAEPL YIQALEMRKK LLGAEHPDVA TSLNNLASLY ESQGRYTEAE PLYIQALEIF KKLLGAEHPD VATSLNNLAF LYNAQGRYTE AEPLYIQALD MTKKLLGAEH PSVATSLNNL ALLYEDQGRY TEAEPLYIQA LEMRKKLLGA EHPDVATSLN NLAGLYNAQG RYTEAEPLYI QALEMRKKLL GAEHPDVATS LNNLASLYES QGRYTEAEPL YIQALEIFKK LLGAEHPDVA SSLNNLAGLY KDQGRYTEAE PLYIQALEMR KKLLGAEHPD VASSLNNLAA LYKDQGRYTE AEPLYIQALE MRKKLLGAEH PDVASSLNNL AGLYNAQGRY TEAEPLYIQA LEMRKKLLGA EHPLVASSLN NLAGLYNAQG RYTEAEPLYI QALEIFKKLL GAEHPLVATS LNNLAGLYNA QGRYTEAEPL YIQALEMRKK LLGAEHPYVA TSLNNLALLY YAQGRYTEAE PLYIQALEMR KKLLGAEHPD VASSLNNLAT LYNVQGDIAS AVQYLKRGLE VQEKNLTYNL AAGAEPQKNK YLQTISGAKA RAISLHLQTA PNDPAATTLA LTTILRRKGR LLEFFTTSRQ ILRQQLDTQG LQWLDELNNI YSELSTLLYN GPKDLPLETY KENFALLEQQ AKELEDKISR RSSQFRAATQ PVTLEAIQEL IPANAALVEF VQYSPFDPKT GKFGKPRYGV YVLSREGEPQ GMDLGTVEEF KNIIKVFRTS LRDKSQTPLK QLKDTARELD QKLMQPVRQL LGSQKQILIS PDSNLNLIPF EALVDENNRF LVENYSFTYL SSGRDLLTFT STPRNTSPAV LLGYPTYSEK DQVTIKSKGR FGVSDLGLSG LPGTEEEVKA IGELLGVEPL LREAATEEAV KQVQSPFILH IATHGLFETI EDPEKYPTIN KNSLLRASLA LAGVKEEQID GDNGLLTALE AAGLNLLGTE LVVLSACDTG LGGISPGEGV YGLRRAFAIA GSQSQVISLW KVDDQGTKDL MVKYYQRLLG GDMGRTEALR QTQLEMLGGE AGEKYSHPYF WASFIPSGNW LAIPPRVESK KSKVNSQR
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