Gene Tcr_2192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2192 
Symbol 
ID3762114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp2418851 
End bp2419447 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content52% 
IMG OID637786941 
Producthypothetical protein 
Protein accessionYP_392454 
Protein GI78486529 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTACT TTACGCCAAC CGAATTAGCA CAAGCTGAAA TCGAAATTAA AAAAAGTCGC 
TTCCTTGCGT TTGCCAAAGG CATCCAAAGC CGGGCAGAAG GGATGGACTG GCTGGCCGAA 
ATGAAGCTCG CGTACCCCGA TGCCCGTCAT CATTGTTGGG CCTATGTTTT GGGAGACCCT 
GCCTGCGCGA CGAATGCCGG CATGGGAGAT GACGGCGAAC CCTCGGGAAC GGCTGGCAAA 
CCGATCTTGA ATGTCCTTCA GCATAAAGGG GTGGGCGACG TCATGGTGAT TGTGGTGCGC 
TATTTTGGGG GCATCAAGTT GGGCGCGGGT GGGTTAACGC GCGCCTACAG TCAATCTGCC 
CAAGCGGTGA TGGACATTTT ACCCGCCCAT AAACCCGTCC TACGCACTTC CGTGACGATT 
AATTGTGATT TTTCACAAGA ACAACCGATC CGTCATTTAT TATCAACGTT AGATGGTCAG 
GTTGAGTCGA TTGACTATGC CCAGCAAGTG ACGATTGAAG CCCGCTTGCC AACCATTCAT 
CTGGCGTCGT TCACCGACTC ACTAAACGCC ATCGGTTGTC CGTTTAAATG CCTTTGA
 
Protein sequence
MSYFTPTELA QAEIEIKKSR FLAFAKGIQS RAEGMDWLAE MKLAYPDARH HCWAYVLGDP 
ACATNAGMGD DGEPSGTAGK PILNVLQHKG VGDVMVIVVR YFGGIKLGAG GLTRAYSQSA 
QAVMDILPAH KPVLRTSVTI NCDFSQEQPI RHLLSTLDGQ VESIDYAQQV TIEARLPTIH 
LASFTDSLNA IGCPFKCL