| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1328 |
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| Symbol | |
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| ID | 3760690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1442951 |
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| End bp | 1443667 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637786060 |
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| Product | pseudouridine synthase RluA-like |
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| Protein accession | YP_391597 |
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| Protein GI | 78485672 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.182697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTGA ATACGTTACC AATTACTGTG GTATTTCAGT CGACTGAGTT TATTGTGGTT
GATAAACCGG CGGGCATGAA TTTCCATTCC GAACCCGATT CTGATGGACA AAAACAGCCA
GGCCTGGTGG TTTTCGTGCA ACAGCAGCTA GGAGTGGAAG AACTCTATCC TGTACACCGA
CTGGATAAAA TGACCTCTGG TTTGGTTATA TTCGCTTTAA GCAAAGCGTC CGCGAAAGCA
TTCCAGCAAT TGTTCGAAAG CCGACAAATT CAAAAGTTTT ACTTGGCCAT CTCCACTCAC
AAGCCTAAAA AGAAACAGGG CTGGGTGAAA GGCGACATGA TGCCGGCGCG GCGTGGCAGT
TGGAAATTAA GTAAGACGTT AGAGAATCCG GCCATCACTC AATTTATCAG TCAGAATACG
CGACCGGGAG AGCGCTGGTT TTTATTAAAC CCTCATACCG GCAAAACGCA TCAGTTGCGC
GTGGCTTTAA AAAGCTTAGG CGCTCCGATT GCCGGAGATG CACGTTATGC ACTTTCGGCG
GAAGCCGAGC ATGAAGACAG AGGCTATTTG CATGCATTTG CTTTACGCTT CACCTTGCAT
GATGAGTCTT ATGAATTTTG TGTGCCGCCG CAGCAAGGCC AGCGGTTTCA AACAGCCGAA
GCGCAAACGC TTTTGCAACA ATGGCAAACA CCTTGGTCCG CGTTTAAGCG TCAGTGA
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| Protein sequence | MLLNTLPITV VFQSTEFIVV DKPAGMNFHS EPDSDGQKQP GLVVFVQQQL GVEELYPVHR
LDKMTSGLVI FALSKASAKA FQQLFESRQI QKFYLAISTH KPKKKQGWVK GDMMPARRGS
WKLSKTLENP AITQFISQNT RPGERWFLLN PHTGKTHQLR VALKSLGAPI AGDARYALSA
EAEHEDRGYL HAFALRFTLH DESYEFCVPP QQGQRFQTAE AQTLLQQWQT PWSAFKRQ
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