Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0901 |
Symbol | |
ID | 3761372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 979717 |
End bp | 980415 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637785621 |
Product | ExsB |
Protein accession | YP_391171 |
Protein GI | 78485246 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000000228539 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGGATG TTGATGTTAA AAAAGCCGTT GTATTACTGT CTGGTGGTTT AGACTCCGCA ACGGTTCTGG CCATAGCACA AGCGCAGGGG TTTGAATGCC ACACCATTAG CTTTGATTAT GGACAGCGCC ATCGTGCAGA GCTAATCGCT GCAGAACGTA TTTCTCGTGT CTCAGGTGCG AAGACGCATC GTGTCATGGA AATGAATATG CATGCGATTG GTGGTTCTGC GTTGACGGAC GATTCAATTG ATGTGCCTGT CTCTGGCGTT GAGAAAGAAA TGATCCCAGT GACGTATGTG CCTGCACGTA ATACAGTCTT TCTTTCCTAT GCGTTGGCAT TGGCTGAAGT CTTAGAGGCC GATGATATTT TTATCGGGGT GAATGCTGTG GATTATTCAG GGTATCCTGA TTGCCGCCCT GAATATATTG CGGCGTATGA AAAAATGGCC AACTTAGCGA CGAAAGCTGG AGTCGAAGGT CATAAGATGC ATATTCAAAC GCCGTTAATT GATTTGACCA AGGCCGAAAT CATTCAAACG GGGGTGAAAC TCGGGGTTGA TTACAGTCAA ACGGTCTCTT GCTATCAAGC TGATAAAAAT GGCGCTGCCT GCGGTATTTG CGATTCTTGT CGTCTGAGAA AACAGGGCTT TGAAAATGCG GGCGTTACCG ATCCGACCAT TTATGCCTCA AACCTTTAA
|
Protein sequence | MADVDVKKAV VLLSGGLDSA TVLAIAQAQG FECHTISFDY GQRHRAELIA AERISRVSGA KTHRVMEMNM HAIGGSALTD DSIDVPVSGV EKEMIPVTYV PARNTVFLSY ALALAEVLEA DDIFIGVNAV DYSGYPDCRP EYIAAYEKMA NLATKAGVEG HKMHIQTPLI DLTKAEIIQT GVKLGVDYSQ TVSCYQADKN GAACGICDSC RLRKQGFENA GVTDPTIYAS NL
|
| |