Gene Tcr_0710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0710 
Symbol 
ID3760393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp779076 
End bp780053 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content44% 
IMG OID637785423 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_390980 
Protein GI78485055 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000315779 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAA GAATCTACAG TCGAATTGTT GGAACCGGTG GTTATCTTCC TGAGAAGATA 
ATGACAAATA TTGATTTGGA AAAAATAGTC GATACCAGTG ATGAGTGGAT TCGAGAGAGA
ACAGGTATTG AAGAGCGTCG AATTGCAGCA GAGCAAGAAA CGACGTGTGA CTTAGCTGAG
AAGGCTTCCT TGCAAGCGTT AGAAATGGCC GGGCTGGAAG GAAAAGATAT TGAGTTGATT
CTTGTCGCCA CCACCACACC AGATAAAATT TTTCCCAGTA CGGCAACCTT GTTGCAGCAC
CGTTTAGGAA ATCGAGGTGC CCCTGCATTT GATTTACAGG CGGTATGTAC CGGTTTTGTT
TATGCGTTGA GCGTTGCTGA CCAGTATATT AAGAATGGAA TGTATAAACG AGTGCTGGTT
GTTGGGGCGG AGACATTGTC TCGTATCACG AACTGGAATG ACCGCAATAC CTGCGTTTTA
TTTGGGGATG GCGCCGGAGC AGTCGTTTTG GAAGCCTCAA CCGAAACGGG CATTTTGTCG
ACGCATATTC ATGCGGATGG CCAATATGAA GAATTGTTAC ATGTTCCATC AGGCCCTTCG
AAGCTTCCTC AAACCGATGA TGTGGCAGAA AAGACGATGT CAATGAAAGG TAATGAAGTC
TTCAAAGTGG CGGTGAATAC GTTAAGTAAA ATTGCAACAG AAACGCTGGA TGCCAACCAG
ATGCAAAAAG AAGATTTGGA TTGGTTGGTG CCTCATCAAG CGAATTTAAG AATTATTAAA
GCGACGGCCA AGAAGCTGAA GTTAGGTGAT GATCAAACCG TAATTACGGT TAATAAGCAT
GCGAATACGT CAAGTGCTTC TATTCCACTT GCGTTGAATG AAGCGGTGAG AGATGGGCGT
ATTCAAAAAG GCCAGACATT ACTGTTAGAA GCTTTTGGTG GTGGTTTTAC TTGGGGATCC
GCTCTGGTTA AATTCTAA
 
Protein sequence
MNQRIYSRIV GTGGYLPEKI MTNIDLEKIV DTSDEWIRER TGIEERRIAA EQETTCDLAE 
KASLQALEMA GLEGKDIELI LVATTTPDKI FPSTATLLQH RLGNRGAPAF DLQAVCTGFV
YALSVADQYI KNGMYKRVLV VGAETLSRIT NWNDRNTCVL FGDGAGAVVL EASTETGILS
THIHADGQYE ELLHVPSGPS KLPQTDDVAE KTMSMKGNEV FKVAVNTLSK IATETLDANQ
MQKEDLDWLV PHQANLRIIK ATAKKLKLGD DQTVITVNKH ANTSSASIPL ALNEAVRDGR
IQKGQTLLLE AFGGGFTWGS ALVKF