Gene Tcr_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0187 
SymboltrkA 
ID3762243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp219221 
End bp220618 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content45% 
IMG OID637784892 
Productpotassium transporter peripheral membrane component 
Protein accessionYP_390457 
Protein GI78484532 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAA TTATTCTTGG TGCCGGACAA GTCGGTACAT CACTTGCAGA GCTGCTTGCC 
ATCGAAAACA ATGATGTCAC AGTGGTTGAC CTTGATAGAA CCAATCTTCA ACGGTTACAA
GATCGGTTGG ACATTCGTAC TGTGAATGGT CACGCCTCTA ACCCAGACGT CTTAAACCAA
GCCGGTTTGG AAGAAGCCGA TATGTTGATC GCCGCCACAC ACGAAGATGA CACCAATATC
GTTGCCTGTC AGTTGGCTCA GATCATGCAT AAAACGCCCA CCAAAATTGC GCGCGTTAGA
AGTCAAAGCT ACTTAAACCA CCCTGAATTG TTTGATCGAC AACAGAATAC GGATGCGATC
CCAATCAATG TTTTAATCAG CCCTGAAACG CTGGTTAAAA ACTATATCCT GCAATTGATT
AACTACCCGG GTTCGCTTCA AGTGGTTGAT TTCTCAGAAG GGAAAGTTCG ATTGGTCGCC
ATTCGGGCTC ACTCTGGCGG CATGATTGTC GGCAAAAAAA TTCGAGAAAT TAAACACCAT
TTACCAGATG GCGTCCATCA CAGGATTGTT GCTATCTATC GACGAGATGA AATCGTCATC
CCAACCGGCA ACGTCACCAT TCAGGTTGGC GACGAAGTTT TCTTTCTCGC CGAACCGTTC
AATATTCCTA AAATTGTTCA GGAATTGCGA CGTGATAAAC TCCGCCCCTC AAGAAACATC
ATGATCGCAG GGGGAGGCAA CATTGGCTTC AACCTCGCCA AAGAGTTGGA AAAAGAGCAT
CAGGTTAAAA TTATCGACCA CAATATGACG CAAGCACGGA AGATTTCTGA GCAGCTGGAG
CAGTCCATTG TCATTCGAGG AGACGTTTCC GACAAATCCT TGCTCATTGA AGAAAACATT
GATGAAATCG ATTTATTTTT AGCGCTGACG AATTCCGATG AAGCTAATAT TATTTCAGGC
ATGCTGGCCA AAAAATTAGG CGTTCGTCGT GTCATTGCCT TGGTAAACAA CCAGTCTTAT
GTGGATTTAA TTCAACTGAA CAGTATCGAT GTCGCGATCT CAGCAGACCA GATCACCACG
AGCCGCTTAC TGCACTATAT GCGTCAAGGC GATACCGTCA AAGCGTTTAC GTTGCGGCGA
GGCGCAGCAG AAGCCATGGA AGTGATTGTG CATGGAAGCG AAAACTCTTC TGAGATTATT
GGAAAAACCA TTGGGGAAAT TCAATGGCCG ACCAGCATTA CCATTGGGTG CATTGTGCGT
GAAAATGAAG TCCTGTTCTC GCACCGAGAT CTAACGATTG AAGCAGAAGA CCATGTCATC
CTTTTCTTGA ATGATCCTAG CCAAGCGGGC CAAATTACAG AGCTCTTTAC ACCAAAGGAA
AAGAAAAGTT GGTTTTAA
 
Protein sequence
MNIIILGAGQ VGTSLAELLA IENNDVTVVD LDRTNLQRLQ DRLDIRTVNG HASNPDVLNQ 
AGLEEADMLI AATHEDDTNI VACQLAQIMH KTPTKIARVR SQSYLNHPEL FDRQQNTDAI
PINVLISPET LVKNYILQLI NYPGSLQVVD FSEGKVRLVA IRAHSGGMIV GKKIREIKHH
LPDGVHHRIV AIYRRDEIVI PTGNVTIQVG DEVFFLAEPF NIPKIVQELR RDKLRPSRNI
MIAGGGNIGF NLAKELEKEH QVKIIDHNMT QARKISEQLE QSIVIRGDVS DKSLLIEENI
DEIDLFLALT NSDEANIISG MLAKKLGVRR VIALVNNQSY VDLIQLNSID VAISADQITT
SRLLHYMRQG DTVKAFTLRR GAAEAMEVIV HGSENSSEII GKTIGEIQWP TSITIGCIVR
ENEVLFSHRD LTIEAEDHVI LFLNDPSQAG QITELFTPKE KKSWF