Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2364 |
Symbol | cbbI |
ID | 3671857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2439662 |
End bp | 2440318 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637711069 |
Product | ribose-5-phosphate isomerase A |
Protein accession | YP_316122 |
Protein GI | 74318382 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.760818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.131374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAG ACGAAATGAA GCGAGCCGTA GCGCGTGCTG CGGTGGATTA TGCCAAGGGC GGCATCATCG GCGTAGGAAC CGGCTCGACC GCGAACCATT TCATCGACGC CCTGGCCGAA GTCAAGGGGC GCATCGAGGG CACGGTGGCG AGTTCCGAGG CGACGGCGGC GCGGCTGAAA AGCCACGGCA TACAGGTGCT CGACCTCAAC AGCGTCGGAG AGCTCGAGGT CTACGTCGAT GGGGCTGACG AGATCACGCA GCATTTCGCG ATGATCAAGG GCGGCGGCGG CGCGCTGACG CGGGAAAAGA TCGTTGCGGC GTGCAGCAAG CAATTCGTCT GTATCGCCGA CGACAGCAAG CTCGTCGACG TTCTCGGCAA ATTCCCGCTG CCGGTCGAGG TGATCCCGAT GGCCCGCTCG CACGTCGCGC GGGAGCTCGT GAAGCTCGGC GGCCAGCCCC GCCTGCGCGA GGGCTTCACG ACCGACAACG GCAACGTGAT CCTCGACGTG CACAACCTTT CGATCATCGA CCCGGTATCG CTCGAGACCG CGATCAACCA GATCGTCGGC GTGGTCACCA ACGGCCTCTT CGCCCGGCGC GGCGCCGACG TGCTGTTGCT CGGCACGTCG ACCGGGGTCA AGACCTTCAC GAGATAG
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Protein sequence | MTQDEMKRAV ARAAVDYAKG GIIGVGTGST ANHFIDALAE VKGRIEGTVA SSEATAARLK SHGIQVLDLN SVGELEVYVD GADEITQHFA MIKGGGGALT REKIVAACSK QFVCIADDSK LVDVLGKFPL PVEVIPMARS HVARELVKLG GQPRLREGFT TDNGNVILDV HNLSIIDPVS LETAINQIVG VVTNGLFARR GADVLLLGTS TGVKTFTR
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