Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1221 |
Symbol | |
ID | 3673310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1274784 |
End bp | 1275980 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637709905 |
Product | succinyldiaminopimelate transaminase |
Protein accession | YP_314979 |
Protein GI | 74317239 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGC GTCTCGACCA ACTCCACCCG TATCCGTTCC AGAAACTGCG CGAGCTGCTC GCCGGAACCG AGCCGAACCC CGAACTCGCG GCGATCAACC TGTCGATCGG CGAACCCAAA CACCCGACCC CGGGCTTCAT CCGCGACGCG CTGGTCGGCG GCCTCGACGG GCTGGCGAAT TATCCCATCA CCCAGGGTTC CGACGCGCTG CGCGCCGCGA TCGCCGGCTG GGCCGCGCGC CGCTATGGCG TCACGCTCGA TCCGGCGAGC GAGGTGCTGC CGGTCAACGG CTCGCGCGAA GCCTTGTTCG CCTTCGCCCA GGCGGCTGTC GACTCGACCC GCCACGGTCG GCGCACGGTG GTCTCGCCCA ACCCCTTCTA CCAGATCTAC GAAGGCGCGA CGCTGCTCGC CGGCGCCCGC CCGTTCTTCC TCAACACGCT GCCCGAGAAC GGCTTCACGA TGGACTGGTC GCGCGTGCCG GAAGACCTCT GGGACAGCAT CAGCCTCGTC TACGTCTGCT CGCCTGGCAA CCCCACCGGC AAGGTCATGA CGCTCGACGA ATGGCGAACC CTGTTCGCGC TCGCCGACCG ACACGGCTTC GTCATCGCCG CCGACGAATG CTATTCGGAG ATCTACTTCG ACGAGGCCCA TCCCCCGCTT GGCGCGCTAA CAGCGTCGCA TCAACTGGGG CGCGGCTGCA GGAACCTCGT GGTCTTCAAC TCGCTGTCCA AGCGCTCCAA CGTGCCCGGG CTGCGCTCGG GCATGGTCGC CGGCGACGCC GAGGTGCTGA AGAAATTCCT GCTCTACCGC ACCTACCACG GCAGCGCGAT GAGCCCGGCC GTGCAGGCGG CGAGCATCGC CGCGTGGAAC GACGAAGCCC ACGTCCTCGA CAACCGTCGC CAGTACGCCG CGAAATTCGC CGCCGTCATA CCGCTGCTGC GCGACGTGCT GTCTTTCGAC GCGCCCGACG CGGCCTTCTA TCTCTGGGCC CGCGTGCCCG GCGGCGACGA CGCCGCGTTC GCGCGCGGCC TCTACGCGCA ACAGCACGTC ACTGTGCTGC CCGGCAGCTT CCTCGCGCGC GACGCCGCCG GGGCCAACCC CGGCAAGGGC TTCGTGCGGA TCGCGCTGGT CGACACGCTC GACGCCTGCG TCGAGGCCGC TGAACGCATC GCGGCCTTCG TCACCGAGGC CGCCTGA
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Protein sequence | MNPRLDQLHP YPFQKLRELL AGTEPNPELA AINLSIGEPK HPTPGFIRDA LVGGLDGLAN YPITQGSDAL RAAIAGWAAR RYGVTLDPAS EVLPVNGSRE ALFAFAQAAV DSTRHGRRTV VSPNPFYQIY EGATLLAGAR PFFLNTLPEN GFTMDWSRVP EDLWDSISLV YVCSPGNPTG KVMTLDEWRT LFALADRHGF VIAADECYSE IYFDEAHPPL GALTASHQLG RGCRNLVVFN SLSKRSNVPG LRSGMVAGDA EVLKKFLLYR TYHGSAMSPA VQAASIAAWN DEAHVLDNRR QYAAKFAAVI PLLRDVLSFD APDAAFYLWA RVPGGDDAAF ARGLYAQQHV TVLPGSFLAR DAAGANPGKG FVRIALVDTL DACVEAAERI AAFVTEAA
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