Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0187 |
Symbol | thrS |
ID | 6091590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 180647 |
End bp | 182569 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642487368 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_001738230 |
Protein GI | 170287992 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00194489 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAA AGGTGAAGCT TCCAGATGGA AAAGAAAAAG AGTACGACAG AGGCATCACA CCGGCGGAGA TCGCAAAAGA ACTGGGCGTA AAAAAGGCGA TCGGAGCGGT TGTTAACGGT GAACTCTGGG ACCTGAAAAG ACCCATCGAA AATGACTGCG AACTGCGACT TGTAACTCTG GAGGATCCCG AGGCACCCGA GTTCTACAGA CACACCATGG CACACATCCT CGCACAGGCT GTGATGAGAA TTTATGGAAA AGAAAACGTA AAGCTGGGAA TCGGCCCCAC TATAGAGAAC GGTTTTTACT ACGACTTCGA CATAAAGAAC GGAAGACTCA CAGAGGAAGA TCTTCCAAAG ATAGAACAGG AGATGAAGAA GATAATAAAG GAAAATCTTC CTATAGAAAG AAAGGAGATC AGCAAAGAAG AGGCAAGAAA GCTTTTCAAC AATCAGCCTT ACAAACTCGA GCTCATAGAG GAGATCGAAG GTGACAGAGT AACGATCTAC CGTCAGGGAG AGTTCGTGGA TCTCTGCAGA GGCCCACATC TTCCTTCGAC GGGAATAGTG AAGCACTTCA AACTCCTCTC TGTTTCAGGT GCGTACTGGC GAGGTAGTGA GAAGAATCCC ATGCTCACAA GAGTTTACGG AACGGCCTTC GCTAAAAAGG AAGACCTCGA CAATTACTTG AAGTTCCTTG AAGAAGCGCA GCGGAGGGAC CACAGAAAAT TGGGACCTCA CCTCGAACTT TTCATGTTGA ACACTGAATA CGCTCCCGGT ATGCCGTTTT TCCTTCCAAA GGGAGTCGTC GTGCTCAACG AATTGATGAA ATTTTCCAGA GAACTCCATC GTGAGAGAGG ATACCAGGAG ATCTTCACAC CGCTCATAAT GAACGAGCAG CTCTGGAAGA TCTCCGGTCA CTGGGATCAC TACGCTGAGA ACATGTACTT CATAGAGAAA GACGAGGAAA GGTACGCGGT GAAACCCATG AACTGTCCCG GTCACATTCT CGTGTACAAG AGCAGAACTG TTTCCTACAG GGACCTACCG CTGAGATTCT TCGAGTTTGG CCGGGTTCAT AGATACGAAA GGAGCGGAGT TCTCCACGGT CTCATGAGGG TGAGATCCTT CACACAGGAC GATGCACACA TATTCTGCAC TCCCGGTCAG ATCGAAGAAG AGATACTCGG CGTTCTCGAT CTCATAAACA CCATCTACAG CCAATTCGGC TTCACCTACA GAGTGGAACT CAGCACGATG CCCGAAGATC ACATGGGTGA CGAAGCGATT TGGGAGAAGG CAACAACTGC CTTGAAGAAT GCCTTAGAAA GGGCCGGTCT TTCGTACAAA GTGAACGAGG GTGAAGGCGC TTTCTACGGT CCGAAAATAG ACTTCCACAT AAGAGATTCG ATAGGAAGAG AGTGGCAGTG CGCCACGATT CAGCTGGATT TCATGATGCC AGAGAAGTTC AACGTCACTT ACATAGGCCC AGACAACAAA GAGCACAGAG CCGTGATGAT ACACAGGGCG ATATACGGTT CGCTCGAAAG GTTCTTTGGC ATCCTGATAG AACACTTCGC TGGAGCGTTT CCAACCTGGC TGGCACCGAT CCAGGTGGCA GTTATTCCCA TATCAGAAAA ACACAACGAC GGTGCGGAAA AGATTGCAAA AAGGATCTCT CAGGAAGGGT TCAGGGTCTT CTTCGATAAC CGCCGTGAAA CTCTTGGATA CCGTATCAGA CAGGCTCAAA CCCAGAAAAT ACCGTACATG ATAATATTAG GCGACAAAGA GCTGGAGAGC GGAAAGATCT CCGTGAGAAC AAGAACAGGA AAAGAGATAA AAGACGTGGA CCTGGAACAC TTTGTTGAAA CCCTGAGAAA CGAAGTTTTG AGCAGAAAGC TCGAACTTTT GATGGAGGGA TGA
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Protein sequence | MKIKVKLPDG KEKEYDRGIT PAEIAKELGV KKAIGAVVNG ELWDLKRPIE NDCELRLVTL EDPEAPEFYR HTMAHILAQA VMRIYGKENV KLGIGPTIEN GFYYDFDIKN GRLTEEDLPK IEQEMKKIIK ENLPIERKEI SKEEARKLFN NQPYKLELIE EIEGDRVTIY RQGEFVDLCR GPHLPSTGIV KHFKLLSVSG AYWRGSEKNP MLTRVYGTAF AKKEDLDNYL KFLEEAQRRD HRKLGPHLEL FMLNTEYAPG MPFFLPKGVV VLNELMKFSR ELHRERGYQE IFTPLIMNEQ LWKISGHWDH YAENMYFIEK DEERYAVKPM NCPGHILVYK SRTVSYRDLP LRFFEFGRVH RYERSGVLHG LMRVRSFTQD DAHIFCTPGQ IEEEILGVLD LINTIYSQFG FTYRVELSTM PEDHMGDEAI WEKATTALKN ALERAGLSYK VNEGEGAFYG PKIDFHIRDS IGREWQCATI QLDFMMPEKF NVTYIGPDNK EHRAVMIHRA IYGSLERFFG ILIEHFAGAF PTWLAPIQVA VIPISEKHND GAEKIAKRIS QEGFRVFFDN RRETLGYRIR QAQTQKIPYM IILGDKELES GKISVRTRTG KEIKDVDLEH FVETLRNEVL SRKLELLMEG
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