| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0067 |
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| Symbol | |
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| ID | 6091466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 60550 |
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| End bp | 61947 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642487246 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_001738112 |
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| Protein GI | 170287874 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGGAG ACAGAGTAAG ACTCATAGTA GTTCTACTGG TACTGGCTGG TGCCCTGCTT
GCCATTTTCT GGCCCAGTAA AGGAGGATGG ATATCCAACA TTCGTCTTGG TTTGGATATA
AAAGGTGGTG CAAGGATCGA ATACATGGTT GAAGTTCAGC AAGGAACAGA AAATCCTTCC
GATGTTGTGG ATGACGTATG GACCGTGCTG AGAAACAGGC TCGATGCGGC TGGTTACACA
GAAGCGGCCG TGAAGAAAGT ACTCCGGGAT AACAAATACT ACATAGTAGT GGAGATACCC
GGGGCGACCG ACACGGTCCA GGCGGAAAAG TTGATCGGAT CGACGGGTGT CCTTTACTTT
GCTCAGGTTC TCGATGAGTA CCTCGGTGAA GATCCCAGCA AAGTACCTGA ACTTTCCCTT
GAAGCCAGAA GAGAGAACGC AGTATGGCTC AAAGGAAGAG ATGGAAAGTG GTACCTCGTG
AAAAAAGAGA TAATGGGAAG GAAAGACCTG GTTCTTGAAG CTCCAAGAAT CGTGTATGCA
AGACCGGAAG TGGAGACAAG AACTGGAAGA TACGGCTACA AGGTTTCCTT TGAACTCGCG
AAGGAATATG TTGATATATT CAAAAAGATC ACACAAGCGC TGTACGTTCC CGAGGGAACT
TATGATCCAA AGAAGAGACT CGCTATAGTG CTCGACGATG TTGTTCAATT CGTTGGTCAA
GTGGTTGCAA TCATAACTGA TGGGAAGGCA GAGATAACAG GTAATTTCTC ACTGGAAGAA
GCGAAACAGC TCGCTGCCAT TCTAAGGAGT GGCGCGCTTC CCGCAAGGCT CGTAAAAACC
TCTTCGGGAT GGGTTGCACC GCTCCTCGGG CGTGATGTGA TCGATGCTTC CTTGAAAGCA
GGAATAATCG GACTAATACT CGTTCTCGTT TACATGATCA TTTACTACAG AACGATGGGC
ATAGTTGCCG ATCTTGCGCT CATTTACAAC ACCGTACTAC TTCTTGGTGT GATGGCAGCC
GGCAAATTCA TTCTCACCCT CCCTGGAATA GCGGGTATCA TCCTCACTAT AGGAACGACC
GTCGATGGAA ACGTGATCAT ATATGAGAGG ATAAAAGAAG AGATGAGGCT GGGTAAACCT
GTTAAAACTT CCATAGCGGC TGGTTTCGAC AGATCGCTTT CGACGATACT CGACGCGAAC
ATCACGACGA TACTCACAGG TCTCATTCTC TACTATTTTG GCACAGGAAC CATCAAAGGC
TTTGCCATCA CTCTGATCAT CGGTGTACTT GGAAGTATAT TTGTGAATCT GGTATTCAGT
CGTCTGCTTC TCGATGCACT TGCGCGCTTC ATCAAGCCAC TCAGAGCCGA TGAGGCACAG
GGAGGGACCG GGCAATGA
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| Protein sequence | MRGDRVRLIV VLLVLAGALL AIFWPSKGGW ISNIRLGLDI KGGARIEYMV EVQQGTENPS
DVVDDVWTVL RNRLDAAGYT EAAVKKVLRD NKYYIVVEIP GATDTVQAEK LIGSTGVLYF
AQVLDEYLGE DPSKVPELSL EARRENAVWL KGRDGKWYLV KKEIMGRKDL VLEAPRIVYA
RPEVETRTGR YGYKVSFELA KEYVDIFKKI TQALYVPEGT YDPKKRLAIV LDDVVQFVGQ
VVAIITDGKA EITGNFSLEE AKQLAAILRS GALPARLVKT SSGWVAPLLG RDVIDASLKA
GIIGLILVLV YMIIYYRTMG IVADLALIYN TVLLLGVMAA GKFILTLPGI AGIILTIGTT
VDGNVIIYER IKEEMRLGKP VKTSIAAGFD RSLSTILDAN ITTILTGLIL YYFGTGTIKG
FAITLIIGVL GSIFVNLVFS RLLLDALARF IKPLRADEAQ GGTGQ
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