Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0066 |
Symbol | |
ID | 6091465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 59672 |
End bp | 60553 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642487245 |
Product | protein-export membrane protein SecF |
Protein accession | YP_001738111 |
Protein GI | 170287873 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAAG AAATTGATTT CATGGGAAAG TCGAAGATCT TCATTACGAT CTCGCTGATA CTGATAGCGA TATCCATCGT TTCCATATTC ACGAAAGGAT TCAACTTCGG AGTGGAGTTC ACCGGTGGTT CCGAGATCAT AGTGAGATTT GAAAACAAAG AGGTCACGGA AAACGACATA AGGGCCGCTA TTTCTCAAAT CTCTGAAGAA TTTGCAAACG CGAGAATAGT AGAAGTTCGT TCCGCGGGAG ATCCTTCAAA CGTTCAGAAG TACTCCATTA TCGTTCCGAA AACTTACGAA CCGGATGAAA AGCAGAAAAT TCAGGAAGAG ATGGAAAAGC TCCTTTCTGG CAAGGTGGTG TCCTTCAATG AGATCAGTGG AACAGCGGCT GAGGAAATCA GAAGGGGAAC GTGGACGGCG ATTCTGGTGG CTCTTGTTGT GCTCCTCATC TACATAACCA TCAGATTCAG ATTCATCTTT GGAGTCGCCG CTGTTGTGGC TCTGATACAC GATGTGCTCA TCACCATGGG ATTCTTCTCG CTGTTCGGCT ACGAGATAAA CGTCGCGGCG GTGGCAGCGT TTCTCACACT ACTCGGTTAC TCTCTCAACG ACACGATCGT TCTTTCAGAC AGGATCAGGG AGAACATGAG AAGATATCGC GGAAGGAACA TGGTGAACAT CGTGAACATG AGTATAAATC AGGTGCTCGC CAGAACGATA AACACCTCTC TCACCACGTT CTTCGTCGTT TTTGTTCTTC TTCTGTTTGC TGGAAACGCC GTCAAACCCT TCGCTTTCGG AATGACGGTG GGTACGATTG TGGGAACGTA TTCCTCGCTT TACATTGCCT CGCCTATCAT CGTGAAATGG ACAAAACAAT AA
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Protein sequence | MRKEIDFMGK SKIFITISLI LIAISIVSIF TKGFNFGVEF TGGSEIIVRF ENKEVTENDI RAAISQISEE FANARIVEVR SAGDPSNVQK YSIIVPKTYE PDEKQKIQEE MEKLLSGKVV SFNEISGTAA EEIRRGTWTA ILVALVVLLI YITIRFRFIF GVAAVVALIH DVLITMGFFS LFGYEINVAA VAAFLTLLGY SLNDTIVLSD RIRENMRRYR GRNMVNIVNM SINQVLARTI NTSLTTFFVV FVLLLFAGNA VKPFAFGMTV GTIVGTYSSL YIASPIIVKW TKQ
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