Gene TRQ2_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0038 
Symbol 
ID6091437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp33116 
End bp34228 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content48% 
IMG OID642487217 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_001738083 
Protein GI170287845 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATACTGG GTGCCACTGG ATCCATAGGA ACTCAGACAC TCGATGTTTT GAAAAAAGTG 
AAGGGAATTC GATTGATAGG CATCTCGTTT CACAGCAATC TGGAGCTGGC CTTCAAGATC
GTGAAGGAAT TCAACGTGAA AAACGTGGCG GTCACGGGTG ATGTGGAGTT CGAAGACAGT
TCGATCAACG TCTGGAAAGG TCCTCATTCC ATAGAAGAGA TGCTGGAAGC GCTGAAGCCT
GACATCACAA TGGTAGCAGT TTCGGGATTC AGTGGATTGA GGGCGGTGCT TTCGTCTCTG
GAGCACTCGA AAAGGGTGTG CCTTGCAAAC AAAGAATCTC TCGTGTGCGG CGGATTTCTG
GTGAAGAAAA AACTCAAAGA GAAAAGAACT GAACTCATTC CGGTCGATAG TGAACACAGT
GCCATCTTTC AGGTGATAGA ACCAGAAGTG GAAAAGGTGG TTTTGACAGC TTCTGGAGGT
GCTTTGAGAG ACTGGGAGAT TTCCAAGATC GATAGAGCAA GACCTGAAGA CGTGCTCAGG
CATCCCGTGT GGAATATGGG AGCCCGTATA ACGGTAGATT CTGCAACAAT GGTGAACAAG
GCGTTCGAAG TTCTGGAAGC CATGGAGCTC TTCGAGCTGC CCTTCGAGAA GATAGAAGTG
AAGATACACA GAGAGGGGCT GGTTCACGGA GCGGTGGTTT TGCCCGATGG AAACGTCAAA
ATGGTGGTAT CACCACCGGA TATGAGAATA CCGATAAGTT ATGCTCTTTT CTATCCGAGA
CGCGTCGCTC TTGAACCGTT TTTTCTGAGG ACCATCAGCC TTTCTTTTGA AGATCCCGAT
CCCGAAAAAT ACCCTGCGTT CTTTCTTCTG AAAGAGATAA AGGATTCTTA CGCTCTGAGA
ACAGCTTTCA ACGCGGCGGA CGAAGTAGCG GTCGAAGCCT TTCTGAAAGG GAGAATAAGG
TTCGGTGGTA TCCACAGAGT GATAGAGAAA ACTCTCGAAG AGTTTCAAGG ATATCCACAA
CCGCGAACGC TGGATGATGT GGAGCGAATT CATTTCGAAG CGATAAAAAA AGCGGAGAGG
GTGACAGAAT GGTTATCGTC TACTTCATAT TGA
 
Protein sequence
MILGATGSIG TQTLDVLKKV KGIRLIGISF HSNLELAFKI VKEFNVKNVA VTGDVEFEDS 
SINVWKGPHS IEEMLEALKP DITMVAVSGF SGLRAVLSSL EHSKRVCLAN KESLVCGGFL
VKKKLKEKRT ELIPVDSEHS AIFQVIEPEV EKVVLTASGG ALRDWEISKI DRARPEDVLR
HPVWNMGARI TVDSATMVNK AFEVLEAMEL FELPFEKIEV KIHREGLVHG AVVLPDGNVK
MVVSPPDMRI PISYALFYPR RVALEPFFLR TISLSFEDPD PEKYPAFFLL KEIKDSYALR
TAFNAADEVA VEAFLKGRIR FGGIHRVIEK TLEEFQGYPQ PRTLDDVERI HFEAIKKAER
VTEWLSSTSY