Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0038 |
Symbol | |
ID | 6091437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 33116 |
End bp | 34228 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642487217 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_001738083 |
Protein GI | 170287845 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATACTGG GTGCCACTGG ATCCATAGGA ACTCAGACAC TCGATGTTTT GAAAAAAGTG AAGGGAATTC GATTGATAGG CATCTCGTTT CACAGCAATC TGGAGCTGGC CTTCAAGATC GTGAAGGAAT TCAACGTGAA AAACGTGGCG GTCACGGGTG ATGTGGAGTT CGAAGACAGT TCGATCAACG TCTGGAAAGG TCCTCATTCC ATAGAAGAGA TGCTGGAAGC GCTGAAGCCT GACATCACAA TGGTAGCAGT TTCGGGATTC AGTGGATTGA GGGCGGTGCT TTCGTCTCTG GAGCACTCGA AAAGGGTGTG CCTTGCAAAC AAAGAATCTC TCGTGTGCGG CGGATTTCTG GTGAAGAAAA AACTCAAAGA GAAAAGAACT GAACTCATTC CGGTCGATAG TGAACACAGT GCCATCTTTC AGGTGATAGA ACCAGAAGTG GAAAAGGTGG TTTTGACAGC TTCTGGAGGT GCTTTGAGAG ACTGGGAGAT TTCCAAGATC GATAGAGCAA GACCTGAAGA CGTGCTCAGG CATCCCGTGT GGAATATGGG AGCCCGTATA ACGGTAGATT CTGCAACAAT GGTGAACAAG GCGTTCGAAG TTCTGGAAGC CATGGAGCTC TTCGAGCTGC CCTTCGAGAA GATAGAAGTG AAGATACACA GAGAGGGGCT GGTTCACGGA GCGGTGGTTT TGCCCGATGG AAACGTCAAA ATGGTGGTAT CACCACCGGA TATGAGAATA CCGATAAGTT ATGCTCTTTT CTATCCGAGA CGCGTCGCTC TTGAACCGTT TTTTCTGAGG ACCATCAGCC TTTCTTTTGA AGATCCCGAT CCCGAAAAAT ACCCTGCGTT CTTTCTTCTG AAAGAGATAA AGGATTCTTA CGCTCTGAGA ACAGCTTTCA ACGCGGCGGA CGAAGTAGCG GTCGAAGCCT TTCTGAAAGG GAGAATAAGG TTCGGTGGTA TCCACAGAGT GATAGAGAAA ACTCTCGAAG AGTTTCAAGG ATATCCACAA CCGCGAACGC TGGATGATGT GGAGCGAATT CATTTCGAAG CGATAAAAAA AGCGGAGAGG GTGACAGAAT GGTTATCGTC TACTTCATAT TGA
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Protein sequence | MILGATGSIG TQTLDVLKKV KGIRLIGISF HSNLELAFKI VKEFNVKNVA VTGDVEFEDS SINVWKGPHS IEEMLEALKP DITMVAVSGF SGLRAVLSSL EHSKRVCLAN KESLVCGGFL VKKKLKEKRT ELIPVDSEHS AIFQVIEPEV EKVVLTASGG ALRDWEISKI DRARPEDVLR HPVWNMGARI TVDSATMVNK AFEVLEAMEL FELPFEKIEV KIHREGLVHG AVVLPDGNVK MVVSPPDMRI PISYALFYPR RVALEPFFLR TISLSFEDPD PEKYPAFFLL KEIKDSYALR TAFNAADEVA VEAFLKGRIR FGGIHRVIEK TLEEFQGYPQ PRTLDDVERI HFEAIKKAER VTEWLSSTSY
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