| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0019 |
|---|
| Symbol | |
|---|
| ID | 6091418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 17807 |
|---|
| End bp | 19843 |
|---|
| Gene Length | 2037 bp |
|---|
| Protein Length | 678 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642487198 |
|---|
| Product | flagellar biosynthesis protein FlhA |
|---|
| Protein accession | YP_001738064 |
|---|
| Protein GI | 170287826 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
|---|
| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000195555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGAATG TGGATATAAT CGTTTCTCTG ATGATAGTCG CTATCGTTCT TTTGATGGTG
CTTCCTGTAC CGGACAGGAT GCTGGATTTC TTCCAGATCC TGAATATAAC TCTTTCCATG
ATCATACTGT TTTCCACCAT GTACATAAGA AACGCCCTTG AACTCTCTTC ATTTCCAACA
CTACTTCTTG TGGTGACCCT GTTCAGACTC GGCCTCAACG TAGCCTCAAC AAGGCTCATA
CTCCTTGAGG GTCCAAAGTT CCAGGGACGG GTTATAAGAA CCTTCGGGGA TTTTGTTGTG
AAAGGAGATT ACGTCGTTGG TCTCATCGTC TTTTTCATCC TCGTCATTAT CCAGTTCATC
GTCATCACCA GGGGTGCGGA GAGAATAGCG GAGGTAGCTG CAAGATTCAC TCTCGACGCT
ATGCCCGGAA AACAGATGAG TGTGGATGCC GACCTGAACA GCGGATTGAT AACCGAAGAA
GAAGCGAGGA AAAGGAGAGA AGACATCAGA AGAGAAGCGG ACTTCTATGG AGCCATGGAC
GGTGCGAGTA AATTTGTGAG AGGGGATGCC ATAGCGAGCA TCATAATCGT TTTTATAAAC
ATAATCGGTG GACTTCTGAT AGGCATGCTC AGACATGGGA TGAGCCTTGC AGAGGCTGCG
CAGGAGTACG TGATTCTCAC CGTAGGAGAT GGCCTTGCGG CACAGATCCC GGCTCTTCTC
GTTTCAACCG CCACCGGTAT AATCGTATCC AGGGCCGCAT CCAAGGAAAA TCTCGGGAAA
GATCTTGTCA CGGAACTTTC GAGAGAAACA AAAGTACTTC TTCTCACCGG TGGAGTGCTG
ATTTTTCTGG GAATCTTCAC TCCTATACCG TTCTTCAGCG CCATTCTTGG TGGAGCGCTG
ATCTTTCTTG CGATGTACAC CTCCAGAGCC GTTCCTCAAG AAGAGCTGGT GGGACCTGCT
CCTGCAGAAA GACCCGGTGG GCCTGTTTTA TCTACACCTG AAGAGGTTTC TGAGATCATA
CAGAGCGATA CCGTTGAGGT GGAGATCGGC TATGGACTGA TACCGCTCGC CGATCCATCA
CAGGGAGGAG ACCTCCTCGA TAGAATCACT TCCATCAGAA AACAGCTCGC GTTCGAGCTG
GGACTCGTCG TTTCCCCCAT CAGGGTGAGG GACAGCGTTC TTTTAAAACC CAATGAATAT
TCCATAAAGA TCCGTGGAAG TGAAGTTGCG AGGTACGAGC TCGTACCCAA CAGGCTCCTC
GCCATAAATC CAGGGACTGC TAAGGAAAAG ATTCCCGGTA TTCCAACCAG AGAACCAGCG
TTCAATCTGG AAGCATACTG GATAGAAGAG TGGAGAAAGG AAGAAGCCCA GCAAAAAGGT
TACACGGTCG TGGATCCACC AACTGTGTTC GCCACGCACC TTTCTGAAGT TCTGAGGAGA
CACGCCGATG AGCTCCTCGG CTTCAAAGAG CTCGAACTTC TTATAGAAGG ACTGAAAGAG
AAGTTTCCCA AGCTGGTGGA AGATCTCATA CCAGATGTTT TGAAACCCGC TGAAGTCAAG
AAAGTGCTTC AGAGACTTCT GAAGGAAGGG GTGTCCATTC GAAACCTTCC AACGATCTTT
GAAATTCTAC TTGAGAGTGC TGAGAAAAGT AAAGATATAG ACTACCTTGT GGAAAGTGTG
AGAAAGGCAC TGAAACGTCA AATAGCTTCG ATGGTCCGCT CCGAAGACGG GAAGATACAC
GCGATCGTTC TGGAGAGGGA CCTCGAACAG AAACTCCTGG AGTCGCTGAA AGAAATAGGA
GAAGAAAGGG AGCTCCTTCT CAACCCTGAA GTCTCAAGAG AACTGATGAA CAAGATTTCA
AACGAACTGG GAAATCTGAT GAAAAAAGGC TATCAACCTG TGATTGTGTG TTCGGCAAGG
GTCAGACCTT ACTTCTCCAG ATACGTAATG CGAACTATCC CGGGTGTTTC TGTGATCTCT
TACGATGAAA TACCCGATGA CTACACCCTT CAAATTGAAG GTGTGGTGAA ATTATGA
|
|---|
| Protein sequence | MKNVDIIVSL MIVAIVLLMV LPVPDRMLDF FQILNITLSM IILFSTMYIR NALELSSFPT
LLLVVTLFRL GLNVASTRLI LLEGPKFQGR VIRTFGDFVV KGDYVVGLIV FFILVIIQFI
VITRGAERIA EVAARFTLDA MPGKQMSVDA DLNSGLITEE EARKRREDIR READFYGAMD
GASKFVRGDA IASIIIVFIN IIGGLLIGML RHGMSLAEAA QEYVILTVGD GLAAQIPALL
VSTATGIIVS RAASKENLGK DLVTELSRET KVLLLTGGVL IFLGIFTPIP FFSAILGGAL
IFLAMYTSRA VPQEELVGPA PAERPGGPVL STPEEVSEII QSDTVEVEIG YGLIPLADPS
QGGDLLDRIT SIRKQLAFEL GLVVSPIRVR DSVLLKPNEY SIKIRGSEVA RYELVPNRLL
AINPGTAKEK IPGIPTREPA FNLEAYWIEE WRKEEAQQKG YTVVDPPTVF ATHLSEVLRR
HADELLGFKE LELLIEGLKE KFPKLVEDLI PDVLKPAEVK KVLQRLLKEG VSIRNLPTIF
EILLESAEKS KDIDYLVESV RKALKRQIAS MVRSEDGKIH AIVLERDLEQ KLLESLKEIG
EERELLLNPE VSRELMNKIS NELGNLMKKG YQPVIVCSAR VRPYFSRYVM RTIPGVSVIS
YDEIPDDYTL QIEGVVKL
|
|---|
| |