Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0017 |
Symbol | |
ID | 6091416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 15985 |
End bp | 16755 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642487196 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_001738062 |
Protein GI | 170287824 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0256175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAGACCA TATTCAGTTT TCTCGAGGAA AAATTCCTTG CGTGGATGTG TATTTTCACG AGGTTTACGG GATTTTTTTT GATCGCTCCT TTCTTTTCCG AGAGAGCGTT CCCTGTTGAG GTGAGAGTGT TTCTGGGACT GTTCACGAGC TGGTTGATGC TTTTCACAGT TGATGTATCC ATACCCTTGA ACACACCTGT TTTGAGTTTC ACTTTGAATC TGTTTTTCAA CTTTCTCGTT GGGTTCGGAA TCGGTTTTAT CGTTTATCTT TTTCTTCAGG CGTTCAACGG GGCGGGATAC ATCTTTGGTT TTCAAATCGG ATTCGGAATG GAAGAAGTGC TGGCTTTCGG TGAAGAAGAA ACAAACCCCA CGGGAGAATT GGTTTATTTT ATAGCCCTCA CTGTTTTTGT GCTGATAAAG GGACCTGTTC TCGTGTTCGA GGGCTTGAAG GATTCAATCG ATGTCTTCCC CGTGAATCTC ACAGGTGTTG CGGACGGGTT CTTCTCCTAC GTCGTGGAAA GATCGAGTGA CTTCTTTGTG CTGATCCTGA AGATAGGAGC ACCAGTTATC GCTTTCATGC TCATCATAAG CATCGTTCTC GGTATCGTTT CGAGGCTCAT CCCACAGATG AACGTTTTCA TGGTTGGATT GCCCCTGAAA GTGATCATTG GGGTTATATT GATTCTGGGG ATGTTACCGA TATGGGCGGA AGTGGCTCAG AAGATTTCAG CGCTCAGCTG GAACGCTATT CAGGAACTTC TTGGGAAATA G
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Protein sequence | METIFSFLEE KFLAWMCIFT RFTGFFLIAP FFSERAFPVE VRVFLGLFTS WLMLFTVDVS IPLNTPVLSF TLNLFFNFLV GFGIGFIVYL FLQAFNGAGY IFGFQIGFGM EEVLAFGEEE TNPTGELVYF IALTVFVLIK GPVLVFEGLK DSIDVFPVNL TGVADGFFSY VVERSSDFFV LILKIGAPVI AFMLIISIVL GIVSRLIPQM NVFMVGLPLK VIIGVILILG MLPIWAEVAQ KISALSWNAI QELLGK
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