| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1249 |
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| Symbol | |
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| ID | 4076364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1342754 |
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| End bp | 1343974 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638006557 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_613244 |
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| Protein GI | 99081090 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.491768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGATG TCGAAAAAAT CCGCTCTGAC TTTCCGATCC TGTCACGCGA AGTGAACGGA
AAGCCGCTGG TCTATCTCGA TAACGGGGCC TCTGCGCAGA AACCTCAGGT TGTGATCGAT
GCCGTGACCA AGGCATACGC GGAAGAATAT TCAAATGTTC ACCGTGGCTT GCATTATCTT
TCTAATCTCG CGACTGAGAA ATACGAAAGC GTACGCGGCA TCATCGCAAA GTTTTTGAAC
GCGGGTCACG AAGATCACAT CGTGCTGAAT TCCGGAACCA CAGAGGGTAT CAACCTCGTG
GCGTATTCCT GGGCCATGCC GCGGATGGAA GCCGGCGATG AGATCATCCT CTCCGTCATG
GAGCACCATG CGAACATCGT GCCCTGGCAT TTCCTGCGCG AACGCCAAGG TGTCGTCATC
AAATGGATCG ACACGGACGC GGACGGAAGC CTGGACCCGC AAAAGGTTCT GGACGCCATT
ACACCAAAAA CCAAGCTGAT CGCAGTCACC CAGTGTTCCA ATGTCTTGGG AACCGTTGTT
GATGTAAAAT CCATCACAAA AGGCGCGCAT GACAAAGGCG TGCCAGTGCT TGTCGACGGC
TCTCAGGGCG CGGTTCACAT GCCCGTGGAT GTGCAGGATC TCGACTGTGA TTTCTATGCC
GTCACCGGGC ACAAGCTTTA TGGTCCGTCT GGGTCCGGCG CGATCTATAT CAAGCCGGAG
CGTATGGCCG AGATGCGTCC GTTTATTGGC GGCGGCGATA TGATCAAAGA AGTGTCCAAG
GATCAGGTGA TCTACAACGA TCCGCCGATG AAGTTCGAGG CTGGTACGCC AGGGATCGTG
CAGACGATCG GTTTCGGCGT CGCGCTCGAA TATATGATGG AGATCGGAAT GGCAGAAATT
GCCGCCCATG AGGCCGATCT GCGAGACTAT GCATCGGAGC GTTTCAAGGG GTTGAACTGG
TTGAATATTC AGGGCCATGC TCCTGGAAAA GCAGCGATAT TCAGTCTGAC CCTTGAGGGC
GCGGCACATG CGCATGACAT TTCAACCATT CTCGACAAGA AAGGTGTCGC GGTGCGTGCC
GGGCATCATT GTGCGGGGCC TTTGATGGAT CATCTTGGCG TCTCTGCAAC TTGCCGCGCG
AGCTTTGGCA TGTACAACAC GCGTCCAGAG GTAGATACGT TGATTGAGGC GCTAGAACTC
GCACATGAGC TTTTTGGCTA G
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| Protein sequence | MYDVEKIRSD FPILSREVNG KPLVYLDNGA SAQKPQVVID AVTKAYAEEY SNVHRGLHYL
SNLATEKYES VRGIIAKFLN AGHEDHIVLN SGTTEGINLV AYSWAMPRME AGDEIILSVM
EHHANIVPWH FLRERQGVVI KWIDTDADGS LDPQKVLDAI TPKTKLIAVT QCSNVLGTVV
DVKSITKGAH DKGVPVLVDG SQGAVHMPVD VQDLDCDFYA VTGHKLYGPS GSGAIYIKPE
RMAEMRPFIG GGDMIKEVSK DQVIYNDPPM KFEAGTPGIV QTIGFGVALE YMMEIGMAEI
AAHEADLRDY ASERFKGLNW LNIQGHAPGK AAIFSLTLEG AAHAHDISTI LDKKGVAVRA
GHHCAGPLMD HLGVSATCRA SFGMYNTRPE VDTLIEALEL AHELFG
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