Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1170 |
Symbol | |
ID | 8806932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1244460 |
End bp | 1245221 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_003460415 |
Protein GI | 289208349 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.113223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCAGA TCCTCGTGTG GGTGGGGGCG GTCATGTGGC CGTTCGCCCG CATTGGGGCG ATGCTCCTGG TGATGCCGGT GTTCGGTGGC GACCAGCTCA CCGCGACGGT GCGCATCCTG TTTGCCCTGG TACTGGCGAT CTTCGTGGCC ATGCAGGGGC CGGCGCTGCC GGCGGTGGAC CCGATCAGCA TCGAGGGCGT GGTGGTGACC GTGCACCAGA TCCTGATCGG TCTGGTGATG GGGTTCATCC TGCAGATGGT GTTCTCCGCG TTGACGCAGG CCGGCGAGGT GATCGCACTG TCGATGGGGC TTGGTTTCGC CTCGATCGTG GATCCGGCGC AGGGCGTGCA GGTGCCGGTG GTCTCCACGA TCTTCGTGAT CATGGCCACG CTGATCTTCC TGGCGATGAA TGGGCATCTG ATCGCGCTGG AGCTGCTGCT GACGAGCTTC GAGACGCTGC CGGTCGCGCC CTCGGGGCTG GATGCCGAGG CGCTGGCCTC GCTGATCGCG TTTGGCAGTG TGATGTTCCA GGGGGCCGTG CTGGTAGCGA TCCCGGCCGT GGCTTCGCTG TTGCTGGTCA ACCTGTCGAT GGGGGTGATC ACCCGGGCCT CGCCGCAGCT GAACATCTTC GCGGTGGGCT TCCCGATGAT GATCCTGATG GGCTTCATTC TGCTGATGCT GACCATGCCC GGGCTGCCGG AGCGGCTTGG GGATCTGTTG TTCGACGGCT TTGGCCTGAT GCAAGCGATG CTGGGGTTCT AG
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Protein sequence | MEQILVWVGA VMWPFARIGA MLLVMPVFGG DQLTATVRIL FALVLAIFVA MQGPALPAVD PISIEGVVVT VHQILIGLVM GFILQMVFSA LTQAGEVIAL SMGLGFASIV DPAQGVQVPV VSTIFVIMAT LIFLAMNGHL IALELLLTSF ETLPVAPSGL DAEALASLIA FGSVMFQGAV LVAIPAVASL LLVNLSMGVI TRASPQLNIF AVGFPMMILM GFILLMLTMP GLPERLGDLL FDGFGLMQAM LGF
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