| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0548 |
|---|
| Symbol | |
|---|
| ID | 8806289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 581597 |
|---|
| End bp | 582259 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | ribose 5-phosphate isomerase |
|---|
| Protein accession | YP_003459799 |
|---|
| Protein GI | 289207733 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.231532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGG ACGAAATGAA GAAGGCGGTC GCCGAGGCCG CGCTCGAACG CATCGAAAGC
GGCTGGATCG TGGGTGTCGG CACCGGCTCG ACCGCGAACT ACTTTATCGA TGCCCTGGCC
CGGATCAAGG GCAAGATCGA CGGTGCAGTG GCCTCCAGCG AGGCCAGCGC GGAACGCCTG
CGCGGGCACG GGATCGAGGT CCTGGACCTG AACTCCGCCG GCCCCCTTCC GATCTATGTC
GACGGGGCTG ACGAGGCCAC CCGGCACCTG CACCTGACCA AGGGCGGGGG CGGTGCGCTA
ACCCGCGAAA AGATCGTCGC GGCGGCGTCC AAGACCTTCG TCTGCGTCGT GGACGAGACC
AAGGTCGTGG ATTACCTGGG GGCCTTCCCG CTGCCGGTCG AGGTGATCCC GATGGCGCGC
AGCCATGTGG CCCGTGCCCT GTCGAAGCTG GGCGGAAACC CGGAGCTGCG CGAGGGCTTC
AAGACCGACA ACGGCAATGT AATCCTCGAC GTTCACAACC TGCGTATCAT GAATCCGGTG
GAGCTGGAGT CGGAGCTGGA CCATATCGCC GGCGTCGTCA CCAACGGCCT GTTCGCCCGC
CGCCCGGCGG ACGTGATGCT CGTGGGCTCG CCCGCAGGCG TCGAGGAGAT GACCGCCAAG
TAA
|
|---|
| Protein sequence | MTQDEMKKAV AEAALERIES GWIVGVGTGS TANYFIDALA RIKGKIDGAV ASSEASAERL
RGHGIEVLDL NSAGPLPIYV DGADEATRHL HLTKGGGGAL TREKIVAAAS KTFVCVVDET
KVVDYLGAFP LPVEVIPMAR SHVARALSKL GGNPELREGF KTDNGNVILD VHNLRIMNPV
ELESELDHIA GVVTNGLFAR RPADVMLVGS PAGVEEMTAK
|
|---|
| |