Gene TK90_0028 details

Gene Information

• Locus tag: TK90_0028
• ID: 8805757
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. K90mix
• Kingdom: Bacteria
• Replicon accession: NC_013889
• Strand: +
• Start bp: 32987
• End bp: 33730
• Gene Length: 744 bp
• Protein Length: 247 aa
• Translation table: 11
• GC content: 64%
• Product: isochorismatase hydrolase
• Protein accession: YP_003459281
• Protein GI: 289207215

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 0.123472
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCAATA ACGACAACGT CTCCCAGCTC ACTGACTACG ACTCCCTGGA CCCGCTGCGC 
GAGCAGTACC AGGAGAGCCT GATCACGACC CCGGTGCTGC GTCAGGAACT GCGCGAGCAC 
CACGTCGCCC TGCTGTGCAT TGACCTGCAG TACCTGGATG CCGCGCGCGG TCATGGGGTG 
TTCGCCGACT CGGTGCAGTC CGGCGTGCCG CCCGAGGCGC AGGAGTACTA CTTCAACCGC 
CTGGAGCAGA CGGTGCTGCC GAACGTGCGC CGGCTGCAGG ATGCATTCCG CGAGCAGGGG 
CTGGAGGTCA TCCACACGCG TATCCGTTCG CTGACCCACG ACGGGCGCGA CCGCAGCCCG 
GGCCACAAGC GCCTGAACCT GCATGCCGCG CCCGGCTCCA AGGATGCGGA GTTCGTCGAG 
CAGGTCGCAC CGGTGGGCGA CGAGATCGTG CTGGACAAGA CCGCTAGCGG CGTCTTCAAT 
TCGACCAACC TGCACTACAT CCTGCGCAAC CTGAACATCT CGGCACTGTT CATCGTGGGT 
GTGTACTCGA ACGAGTGCGT ATCCACGGCC GTGCGCGATG CCTGTGACCT GGGTTTCTAT 
GTCACGCTGA TGGACGACGC CACCGCCACG GTGACCCCGG AGATGCAGAA GGCGACGATC 
ACCACCATCA AGGATCGCTA CGCCCGCGTG ATGACCACCG ACGAGGCGAT CCGCGAGATC 
AAGAAGGTGA AGGAGGCCTC GTGA 

 

Protein sequence

MANNDNVSQL TDYDSLDPLR EQYQESLITT PVLRQELREH HVALLCIDLQ YLDAARGHGV 
FADSVQSGVP PEAQEYYFNR LEQTVLPNVR RLQDAFREQG LEVIHTRIRS LTHDGRDRSP 
GHKRLNLHAA PGSKDAEFVE QVAPVGDEIV LDKTASGVFN STNLHYILRN LNISALFIVG 
VYSNECVSTA VRDACDLGFY VTLMDDATAT VTPEMQKATI TTIKDRYARV MTTDEAIREI 
KKVKEAS